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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:13.7 nTPM
HPA:13.7 nTPM
GTEx:17.0 nTPM
FANTOM5:50.2 Scaled Tags Per Million
Pig:13.2 nTPM
Mouse:7.2 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.7
Sample id Sample description nTPM
Hippocampus
nTPM: 12.9
2621 Female, age 67, right hemisphere 15.7
1898 Male, age 80, left hemisphere 14.3
2529 Female, age 94, left hemisphere 13.1
1855 Male, age 76, left hemisphere 12.7
2148 Female, age 91, left hemisphere 12.0
1911 Female, age 85, right hemisphere 9.8
Dentate gyrus
nTPM: 12.8
2530 Female, age 94, left hemisphere 19.2
2010 Male, age 76, both hemispheres 13.1
1927 Female, age 91, both hemispheres 11.4
2528 Male, age 74, both hemispheres 11.4
2246 Female, age 85, both hemispheres 10.8
2531 Female, age 67, both hemispheres 10.8
Entorhinal gyrus
nTPM: 13.1
2764 Male, age 80, right hemisphere 14.3
1787 Male, age 76, left hemisphere 14.2
2117 Female, age 91, right hemisphere 14.1
2686 Male, age 75, right hemisphere 12.3
2613 Female, age 94, left hemisphere 12.0
1938 Female, age 85, left hemisphere 11.4
Hippocampus, CA1
nTPM: 12.4
2749 Male, age 80, left hemisphere 16.6
2527 Male, age 74, both hemispheres 14.3
1873 Female, age 85, both hemispheres 11.5
2045 Male, age 76, both hemispheres 10.0
2082 Female, age 91, right hemisphere 9.6
Hippocampus, CA2
nTPM: 13.7
1963 Male, age 80, left hemisphere 16.8
2437 Female, age 94, left hemisphere 16.0
2249 Male, age 74, both hemispheres 13.4
1892 Male, age 76, both hemispheres 12.5
1940 Female, age 85, left hemisphere 11.8
2113 Female, age 91, right hemisphere 11.6
Hippocampus, CA3
nTPM: 12.1
2137 Male, age 80, left hemisphere 13.8
1867 Male, age 76, both hemispheres 12.6
2861 Female, age 67, both hemispheres 12.1
2436 Male, age 74, both hemispheres 11.6
2620 Female, age 94, left hemisphere 11.6
1891 Female, age 85, both hemispheres 10.9
Parahippocampal cortex
nTPM: 12.0
2250 Female, age 67, right hemisphere 14.0
2245 Female, age 91, both hemispheres 13.9
1850 Male, age 80, both hemispheres 13.1
2532 Female, age 72, left hemisphere 12.4
2622 Female, age 67, right hemisphere 11.9
1933 Female, age 85, both hemispheres 11.4
1990 Female, age 91, right hemisphere 10.9
2018 Male, age 76, both hemispheres 10.9
2693 Female, age 94, both hemispheres 10.9
2692 Male, age 74, both hemispheres 10.4
Perirhinal gyrus
nTPM: 13.3
1794 Male, age 80, right hemisphere 14.6
1847 Female, age 91, left hemisphere 14.6
2848 Male, age 76, right hemisphere 12.9
2521 Female, age 94, right hemisphere 12.8
1841 Female, age 85, right hemisphere 11.3
Subiculum
nTPM: 12.5
1977 Female, age 85, both hemispheres 15.7
2619 Male, age 74, both hemispheres 14.4
1901 Male, age 80, both hemispheres 13.5
2729 Female, age 91, right hemisphere 11.9
2042 Male, age 76, both hemispheres 11.4
2438 Female, age 94, left hemisphere 8.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.0
Samples: 197

Max nTPM: 46.0
Min nTPM: 2.1
Std nTPM: 7.3
Median nTPM: 15.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 46.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 45.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 42.5
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 40.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 36.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 34.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 34.2
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 32.1
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 31.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 31.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 29.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 50.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 50.2
FF:10153-102I9 76 years, female 54.3
FF:10169-103B7 60 years, female 46.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 13.2
Samples: 4

Max nTPM: 16.9
Min nTPM: 11.4
Sample A Female 16.9
Sample B Female 13.1
Sample C Male 11.4
Sample D Male 11.5
Entorhinal cortex
nTPM: 10.7
Samples: 4

Max nTPM: 12.6
Min nTPM: 9.2
Sample A Female 10.4
Sample B Female 12.6
Sample C Male 10.4
Sample D Male 9.2
Subiculum
nTPM: 11.1
Samples: 4

Max nTPM: 13.8
Min nTPM: 9.2
Sample A Female 13.8
Sample B Female 11.6
Sample C Male 9.7
Sample D Male 9.2
Ventral hippocampus
nTPM: 12.2
Samples: 4

Max nTPM: 14.0
Min nTPM: 9.8
Sample A Female 12.0
Sample B Female 9.8
Sample C Male 13.0
Sample D Male 14.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 7.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.0
Samples: 4

Max nTPM: 7.4
Min nTPM: 6.6
Sample A Male 7.2
Sample B Male 6.9
Sample C Female 7.4
Sample D Female 6.6
Hippocampal formation
nTPM: 7.2
Samples: 4

Max nTPM: 7.5
Min nTPM: 6.9
Sample A Male 6.9
Sample B Male 7.3
Sample C Female 7.5
Sample D Female 7.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
69608857 Antisense, RP_050426_04_D03, Mouse strain C57BL/6J (56 days, male) 0.8

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The Human Protein Atlas

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