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HS6ST1
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:35.4 nTPM
HPA:35.4 nTPM
GTEx:31.8 nTPM
FANTOM5:31.5 Scaled Tags Per Million
Pig:23.6 nTPM
Mouse:25.3 nTPM
Allen mouse:5.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 35.4
Sample id Sample description nTPM
Hippocampus
nTPM: 28.4
2148 Female, age 91, left hemisphere 33.5
2621 Female, age 67, right hemisphere 32.1
2529 Female, age 94, left hemisphere 28.9
1898 Male, age 80, left hemisphere 28.0
1855 Male, age 76, left hemisphere 26.0
1911 Female, age 85, right hemisphere 21.7
Dentate gyrus
nTPM: 27.6
2531 Female, age 67, both hemispheres 33.9
2528 Male, age 74, both hemispheres 29.8
2530 Female, age 94, left hemisphere 28.2
1927 Female, age 91, both hemispheres 26.5
2246 Female, age 85, both hemispheres 23.8
2010 Male, age 76, both hemispheres 23.6
Entorhinal gyrus
nTPM: 33.6
1787 Male, age 76, left hemisphere 38.6
2686 Male, age 75, right hemisphere 35.5
2117 Female, age 91, right hemisphere 35.2
2613 Female, age 94, left hemisphere 33.3
2764 Male, age 80, right hemisphere 33.0
1938 Female, age 85, left hemisphere 26.0
Hippocampus, CA1
nTPM: 25.1
2082 Female, age 91, right hemisphere 26.5
1873 Female, age 85, both hemispheres 25.5
2527 Male, age 74, both hemispheres 25.3
2749 Male, age 80, left hemisphere 24.6
2045 Male, age 76, both hemispheres 23.8
Hippocampus, CA2
nTPM: 27.2
1940 Female, age 85, left hemisphere 32.8
2113 Female, age 91, right hemisphere 28.2
2437 Female, age 94, left hemisphere 28.2
1963 Male, age 80, left hemisphere 26.3
1892 Male, age 76, both hemispheres 24.8
2249 Male, age 74, both hemispheres 23.2
Hippocampus, CA3
nTPM: 27.7
2861 Female, age 67, both hemispheres 45.4
2620 Female, age 94, left hemisphere 35.5
1891 Female, age 85, both hemispheres 22.2
2137 Male, age 80, left hemisphere 21.9
2436 Male, age 74, both hemispheres 21.0
1867 Male, age 76, both hemispheres 20.5
Parahippocampal cortex
nTPM: 31.7
2622 Female, age 67, right hemisphere 36.8
2250 Female, age 67, right hemisphere 35.9
2693 Female, age 94, both hemispheres 35.8
2245 Female, age 91, both hemispheres 32.6
2532 Female, age 72, left hemisphere 31.7
1933 Female, age 85, both hemispheres 31.5
1990 Female, age 91, right hemisphere 30.1
2692 Male, age 74, both hemispheres 28.5
2018 Male, age 76, both hemispheres 27.6
1850 Male, age 80, both hemispheres 26.2
Perirhinal gyrus
nTPM: 35.4
2521 Female, age 94, right hemisphere 37.9
1841 Female, age 85, right hemisphere 37.4
1794 Male, age 80, right hemisphere 37.1
1847 Female, age 91, left hemisphere 33.3
2848 Male, age 76, right hemisphere 31.3
Subiculum
nTPM: 25.5
2729 Female, age 91, right hemisphere 30.8
2619 Male, age 74, both hemispheres 30.6
1977 Female, age 85, both hemispheres 26.7
1901 Male, age 80, both hemispheres 22.1
2042 Male, age 76, both hemispheres 21.5
2438 Female, age 94, left hemisphere 21.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 31.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 31.8
Samples: 197

Max nTPM: 89.4
Min nTPM: 12.9
Std nTPM: 11.3
Median nTPM: 30.2
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 89.4
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 80.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 77.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 69.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 59.7
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 58.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 57.9
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 57.2
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 55.9
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 55.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 50.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 31.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 31.5
FF:10153-102I9 76 years, female 38.9
FF:10169-103B7 60 years, female 24.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 16.1
Samples: 4

Max nTPM: 18.0
Min nTPM: 12.6
Sample A Female 18.0
Sample B Female 17.6
Sample C Male 16.2
Sample D Male 12.6
Entorhinal cortex
nTPM: 22.4
Samples: 4

Max nTPM: 24.4
Min nTPM: 19.9
Sample A Female 23.3
Sample B Female 21.9
Sample C Male 24.4
Sample D Male 19.9
Subiculum
nTPM: 23.6
Samples: 4

Max nTPM: 34.4
Min nTPM: 17.7
Sample A Female 34.4
Sample B Female 20.3
Sample C Male 21.9
Sample D Male 17.7
Ventral hippocampus
nTPM: 18.3
Samples: 4

Max nTPM: 26.5
Min nTPM: 13.8
Sample A Female 16.0
Sample B Female 13.8
Sample C Male 26.5
Sample D Male 16.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 25.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 25.3
Samples: 4

Max nTPM: 32.5
Min nTPM: 22.8
Sample A Male 22.8
Sample B Male 23.1
Sample C Female 22.9
Sample D Female 32.5
Hippocampal formation
nTPM: 22.0
Samples: 4

Max nTPM: 27.1
Min nTPM: 18.2
Sample A Male 18.2
Sample B Male 22.0
Sample C Female 27.1
Sample D Female 20.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.7
74819258 Antisense, RP_060315_02_D10, Mouse strain C57BL/6J (56 days, male) 7.0
68745281 Antisense, RP_050210_01_F03, Mouse strain C57BL/6J (56 days, male) 4.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
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