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ABI1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:37.4 nTPM
HPA:37.4 nTPM
GTEx:33.3 nTPM
FANTOM5:200.2 Scaled Tags Per Million
Pig:68.5 nTPM
Mouse:137.5 nTPM
Allen mouse:12.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB008375
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 37.4
Sample id Sample description nTPM
Hippocampus
nTPM: 34.5
1855 Male, age 76, left hemisphere 39.7
1898 Male, age 80, left hemisphere 38.7
1911 Female, age 85, right hemisphere 33.2
2148 Female, age 91, left hemisphere 32.3
2529 Female, age 94, left hemisphere 31.9
2621 Female, age 67, right hemisphere 31.1
Dentate gyrus
nTPM: 31.6
1927 Female, age 91, both hemispheres 38.5
2010 Male, age 76, both hemispheres 38.2
2246 Female, age 85, both hemispheres 33.9
2528 Male, age 74, both hemispheres 28.5
2531 Female, age 67, both hemispheres 25.8
2530 Female, age 94, left hemisphere 24.9
Entorhinal gyrus
nTPM: 25.8
1938 Female, age 85, left hemisphere 28.4
2117 Female, age 91, right hemisphere 28.3
1787 Male, age 76, left hemisphere 27.9
2764 Male, age 80, right hemisphere 24.2
2686 Male, age 75, right hemisphere 23.5
2613 Female, age 94, left hemisphere 22.5
Hippocampus, CA1
nTPM: 37.4
2749 Male, age 80, left hemisphere 49.6
1873 Female, age 85, both hemispheres 43.9
2045 Male, age 76, both hemispheres 37.1
2527 Male, age 74, both hemispheres 29.5
2082 Female, age 91, right hemisphere 26.7
Hippocampus, CA2
nTPM: 30.4
1892 Male, age 76, both hemispheres 37.5
1963 Male, age 80, left hemisphere 35.3
1940 Female, age 85, left hemisphere 28.7
2113 Female, age 91, right hemisphere 28.4
2249 Male, age 74, both hemispheres 27.2
2437 Female, age 94, left hemisphere 25.5
Hippocampus, CA3
nTPM: 32.4
2137 Male, age 80, left hemisphere 43.9
1867 Male, age 76, both hemispheres 33.3
1891 Female, age 85, both hemispheres 31.3
2620 Female, age 94, left hemisphere 29.9
2861 Female, age 67, both hemispheres 28.8
2436 Male, age 74, both hemispheres 27.0
Parahippocampal cortex
nTPM: 28.3
2018 Male, age 76, both hemispheres 32.1
2250 Female, age 67, right hemisphere 30.8
2245 Female, age 91, both hemispheres 30.5
1850 Male, age 80, both hemispheres 29.1
1933 Female, age 85, both hemispheres 28.5
2693 Female, age 94, both hemispheres 28.5
2622 Female, age 67, right hemisphere 27.0
2692 Male, age 74, both hemispheres 25.9
1990 Female, age 91, right hemisphere 25.4
2532 Female, age 72, left hemisphere 24.9
Perirhinal gyrus
nTPM: 29.8
1841 Female, age 85, right hemisphere 31.1
1847 Female, age 91, left hemisphere 30.5
1794 Male, age 80, right hemisphere 29.5
2521 Female, age 94, right hemisphere 29.1
2848 Male, age 76, right hemisphere 28.7
Subiculum
nTPM: 29.3
2042 Male, age 76, both hemispheres 31.5
1901 Male, age 80, both hemispheres 31.4
2729 Female, age 91, right hemisphere 31.0
2438 Female, age 94, left hemisphere 28.5
2619 Male, age 74, both hemispheres 27.0
1977 Female, age 85, both hemispheres 26.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.3
Samples: 197

Max nTPM: 79.1
Min nTPM: 14.3
Std nTPM: 11.0
Median nTPM: 32.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 79.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 68.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 67.2
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 62.1
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 59.0
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 58.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 57.4
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 57.3
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 55.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 54.3
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 51.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 200.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 200.2
FF:10169-103B7 60 years, female 268.9
FF:10153-102I9 76 years, female 131.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 68.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 68.5
Samples: 4

Max nTPM: 92.1
Min nTPM: 45.7
Sample A Female 92.1
Sample B Female 70.7
Sample C Male 45.7
Sample D Male 65.6
Entorhinal cortex
nTPM: 35.4
Samples: 4

Max nTPM: 39.5
Min nTPM: 30.0
Sample A Female 39.5
Sample B Female 36.9
Sample C Male 35.2
Sample D Male 30.0
Subiculum
nTPM: 37.7
Samples: 4

Max nTPM: 46.2
Min nTPM: 34.5
Sample A Female 46.2
Sample B Female 34.5
Sample C Male 35.3
Sample D Male 34.9
Ventral hippocampus
nTPM: 52.9
Samples: 4

Max nTPM: 78.6
Min nTPM: 35.6
Sample A Female 54.0
Sample B Female 35.6
Sample C Male 43.3
Sample D Male 78.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 137.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 89.1
Samples: 4

Max nTPM: 101.3
Min nTPM: 83.5
Sample A Male 87.8
Sample B Male 83.8
Sample C Female 101.3
Sample D Female 83.5
Hippocampal formation
nTPM: 137.5
Samples: 4

Max nTPM: 151.7
Min nTPM: 121.1
Sample A Male 133.7
Sample B Male 143.6
Sample C Female 151.7
Sample D Female 121.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.1
532610 Antisense, RP_040810_02_E08, Mouse strain C57BL/6J (56 days, male) 12.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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