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DAB2IP
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:23.6 nTPM
HPA:23.6 nTPM
GTEx:19.6 nTPM
FANTOM5:15.3 Scaled Tags Per Million
Pig:21.1 nTPM
Mouse:20.0 nTPM
Allen mouse:1.6 Expression energy

MIDBRAIN - Annotated protein expression
Pending normal tissue analysis

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 23.6
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 23.6
2586 Male, age 75, left hemisphere 47.7
2219 Male, age 76, both hemispheres 36.5
2666 Male, age 74, left hemisphere 25.3
2019 Male, age 18, unknown 20.1
1827 Male, age 72, unknown 20.0
2828 Female, age 72, unknown 19.6
1830 Male, age 51, unknown 17.6
1833 Male, age 53, unknown 17.5
2411 Female, age 72, unknown 16.0
1870 Female, age 42, unknown 15.7
Dorsal raphe nucleus
nTPM: 17.9
2047 Male, age 72, unknown 22.9
1828 Male, age 53, unknown 19.7
2016 Female, age 72, unknown 16.5
2750 Male, age 76, both hemispheres 15.7
2298 Female, age 72, unknown 14.7
Inferior colliculus
nTPM: 23.6
1890 Male, age 53, unknown 26.3
2097 Female, age 72, unknown 23.4
1848 Female, age 42, unknown 22.9
2849 Male, age 72, unknown 21.9
Median raphe nucleus
nTPM: 17.0
2220 Male, age 76, midline 17.0
Pedunculopontine tegmental nucleus
nTPM: 15.2
1921 Female, age 85, both hemispheres 20.7
2334 Male, age 80, both hemispheres 15.9
2338 Male, age 61, both hemispheres 9.1
Periaquaductal grey, anterior
nTPM: 23.0
1795 Male, age 51, unknown 26.4
1947 Male, age 18, unknown 21.4
2502 Female, age 75, unknown 21.3
Periaquaductal grey, dorsal
nTPM: 16.9
2464 Female, age 72, unknown 17.9
1831 Male, age 72, unknown 17.8
1840 Male, age 53, unknown 16.1
2850 Male, age 76, both hemispheres 16.0
Periaquaductal grey, lateral
nTPM: 16.9
2140 Male, age 76, both hemispheres 18.6
2053 Male, age 18, unknown 17.9
2272 Male, age 74, both hemispheres 14.1
Pretectal area
nTPM: 18.3
2825 Male, age 18, unknown 22.0
1944 Female, age 72, unknown 21.8
2007 Male, age 72, unknown 20.9
1816 Male, age 51, unknown 19.8
2407 Male, age 75, both hemispheres 19.8
1817 Female, age 42, unknown 18.1
2667 Female, age 75, unknown 17.1
1815 Male, age 53, unknown 17.0
2316 Male, age 76, right hemisphere 16.8
2224 Female, age 72, unknown 15.3
2273 Male, age 74, both hemispheres 12.8
Red nucleus
nTPM: 21.7
2584 Male, age 75, left hemisphere 29.9
2588 Male, age 74, left hemisphere 28.1
1904 Male, age 53, unknown 23.9
2227 Male, age 72, unknown 23.8
1954 Female, age 42, unknown 23.1
2769 Male, age 72, unknown 23.0
2725 Female, age 75, unknown 20.2
2785 Male, age 18, unknown 19.0
2823 Male, age 76, right hemisphere 18.4
2503 Female, age 72, unknown 17.6
1865 Male, age 51, unknown 17.2
1821 Female, age 72, unknown 16.6
Substantia nigra
nTPM: 20.8
2583 Male, age 75, right hemisphere 27.5
2665 Male, age 74, both hemispheres 26.3
1916 Female, age 42, unknown 23.5
2699 Male, age 18, unknown 22.6
1851 Male, age 51, unknown 21.6
2590 Female, age 75, unknown 18.6
1941 Male, age 53, unknown 18.3
2241 Male, age 72, unknown 17.9
1889 Female, age 72, unknown 17.2
2409 Female, age 72, unknown 14.6
Superior colliculus
nTPM: 17.9
2664 Male, age 75, both hemispheres 27.1
2668 Female, age 75, unknown 23.3
2087 Female, age 72, unknown 20.1
1796 Male, age 53, unknown 19.4
1839 Male, age 51, unknown 18.7
1895 Male, age 76, right hemisphere 16.6
2261 Male, age 18, unknown 16.5
2587 Male, age 74, left hemisphere 14.3
1995 Male, age 72, unknown 12.6
1913 Female, age 42, unknown 10.8
Ventral tegmental area
nTPM: 20.7
1942 Male, age 51, unknown 22.9
2021 Male, age 53, unknown 21.5
1915 Female, age 42, unknown 21.1
2410 Female, age 72, unknown 20.5
2218 Male, age 76, both hemispheres 20.4
2223 Female, age 72, unknown 17.5

MIDBRAIN - GTEx RNA-seqi
Average nTPM 19.6
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 19.6
Samples: 139

Max nTPM: 34.4
Min nTPM: 8.5
Std nTPM: 5.3
Median nTPM: 19.2
GTEX-13PDP-0011-R2b-SM-5O9DH 60-69 years, male 34.4
GTEX-12WSD-0011-R2a-SM-5LZWB 60-69 years, female 32.8
GTEX-1HT8W-0011-R2a-SM-CMKH9 30-39 years, male 32.1
GTEX-1H23P-0011-R2a-SM-CKZP3 60-69 years, male 31.8
GTEX-13OW8-0011-R2a-SM-5L3G2 60-69 years, male 31.5
GTEX-OXRO-0011-R2A-SM-3NB1W 60-69 years, female 29.7
GTEX-13SLW-0011-R2b-SM-5O9C6 70-79 years, male 28.5
GTEX-14BIN-0011-R2a-SM-5S2RJ 50-59 years, female 28.5
GTEX-1GN2E-0011-R2a-SM-9WG7D 60-69 years, male 28.5
GTEX-1J1OQ-0011-R2b-SM-ARU88 40-49 years, female 28.4
GTEX-12WSF-0011-R2a-SM-5DUVU 70-79 years, male 27.9
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 15.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 15.3
FF:10158-103A5 76 years, female 15.3

MIDBRAIN - Pig RNA-seqi
Average nTPM 21.1
Pig sample Sample description nTPM
Midbrain
nTPM: 20.9
Samples: 4

Max nTPM: 24.3
Min nTPM: 16.1
Sample A Female 23.2
Sample B Female 16.1
Sample C Male 24.3
Sample D Male 19.9
Periaqueductal gray
nTPM: 14.7
Samples: 3

Max nTPM: 16.4
Min nTPM: 12.7
Sample B Female 15.0
Sample C Male 16.4
Sample D Male 12.7
Substantia nigra
nTPM: 20.6
Samples: 4

Max nTPM: 23.9
Min nTPM: 17.2
Sample A Female 22.3
Sample B Female 18.9
Sample C Male 23.9
Sample D Male 17.2
Superior colliculi
nTPM: 21.1
Samples: 4

Max nTPM: 26.9
Min nTPM: 15.9
Sample A Female 19.7
Sample B Female 15.9
Sample C Male 22.0
Sample D Male 26.9

MIDBRAIN - Mouse RNA-seqi
Average nTPM 20.0
Mouse sample Sample description nTPM
Midbrain
nTPM: 20.0
Samples: 4

Max nTPM: 21.2
Min nTPM: 18.4
Sample A Male 20.4
Sample B Male 18.4
Sample C Female 19.8
Sample D Female 21.2

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 1.6
71496405 Antisense, RP_050913_04_E03, Mouse strain C57BL/6J (56 days, male) 1.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.