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NUMA1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:24.0 nTPM
HPA:24.0 nTPM
GTEx:29.3 nTPM
FANTOM5:77.4 Scaled Tags Per Million
Pig:26.4 nTPM
Mouse:30.4 nTPM
Allen mouse:3.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019841Antibody HPA019859Antibody HPA029912
Glial cells HighHighLow
Neuronal cells MediumMediumHigh






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.0
Sample id Sample description nTPM
Hippocampus
nTPM: 17.8
2529 Female, age 94, left hemisphere 26.2
1911 Female, age 85, right hemisphere 22.8
2621 Female, age 67, right hemisphere 17.5
2148 Female, age 91, left hemisphere 17.1
1855 Male, age 76, left hemisphere 14.1
1898 Male, age 80, left hemisphere 9.0
Dentate gyrus
nTPM: 19.8
2010 Male, age 76, both hemispheres 25.0
2530 Female, age 94, left hemisphere 23.2
2246 Female, age 85, both hemispheres 21.6
2531 Female, age 67, both hemispheres 21.2
2528 Male, age 74, both hemispheres 18.4
1927 Female, age 91, both hemispheres 9.2
Entorhinal gyrus
nTPM: 23.5
2764 Male, age 80, right hemisphere 29.4
2117 Female, age 91, right hemisphere 29.1
1787 Male, age 76, left hemisphere 24.3
2686 Male, age 75, right hemisphere 19.9
2613 Female, age 94, left hemisphere 19.8
1938 Female, age 85, left hemisphere 18.5
Hippocampus, CA1
nTPM: 15.4
2082 Female, age 91, right hemisphere 25.5
2527 Male, age 74, both hemispheres 18.8
2045 Male, age 76, both hemispheres 15.7
1873 Female, age 85, both hemispheres 13.7
2749 Male, age 80, left hemisphere 3.4
Hippocampus, CA2
nTPM: 18.6
2437 Female, age 94, left hemisphere 25.8
2113 Female, age 91, right hemisphere 25.1
1940 Female, age 85, left hemisphere 22.7
2249 Male, age 74, both hemispheres 19.4
1963 Male, age 80, left hemisphere 12.9
1892 Male, age 76, both hemispheres 5.6
Hippocampus, CA3
nTPM: 16.5
1891 Female, age 85, both hemispheres 24.8
2436 Male, age 74, both hemispheres 22.1
2620 Female, age 94, left hemisphere 17.3
2861 Female, age 67, both hemispheres 16.0
1867 Male, age 76, both hemispheres 12.5
2137 Male, age 80, left hemisphere 6.1
Parahippocampal cortex
nTPM: 21.5
2532 Female, age 72, left hemisphere 29.1
2018 Male, age 76, both hemispheres 26.2
2692 Male, age 74, both hemispheres 25.8
2622 Female, age 67, right hemisphere 25.6
1990 Female, age 91, right hemisphere 23.4
1850 Male, age 80, both hemispheres 20.7
2245 Female, age 91, both hemispheres 19.6
2693 Female, age 94, both hemispheres 16.1
1933 Female, age 85, both hemispheres 15.0
2250 Female, age 67, right hemisphere 13.9
Perirhinal gyrus
nTPM: 19.2
1794 Male, age 80, right hemisphere 23.8
2521 Female, age 94, right hemisphere 19.9
2848 Male, age 76, right hemisphere 18.8
1841 Female, age 85, right hemisphere 18.5
1847 Female, age 91, left hemisphere 14.8
Subiculum
nTPM: 24.0
2042 Male, age 76, both hemispheres 29.6
2619 Male, age 74, both hemispheres 26.6
1977 Female, age 85, both hemispheres 25.2
2438 Female, age 94, left hemisphere 24.4
1901 Male, age 80, both hemispheres 20.8
2729 Female, age 91, right hemisphere 17.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 29.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 29.3
Samples: 197

Max nTPM: 76.6
Min nTPM: 8.4
Std nTPM: 11.9
Median nTPM: 27.0
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 76.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 72.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 70.4
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 60.6
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 60.1
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 57.9
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 54.6
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 53.9
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 53.7
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 52.7
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 50.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 77.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 77.4
FF:10153-102I9 76 years, female 99.5
FF:10169-103B7 60 years, female 55.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 26.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 24.4
Samples: 4

Max nTPM: 28.9
Min nTPM: 19.6
Sample A Female 28.9
Sample B Female 24.0
Sample C Male 25.2
Sample D Male 19.6
Entorhinal cortex
nTPM: 21.7
Samples: 4

Max nTPM: 25.6
Min nTPM: 19.2
Sample A Female 25.6
Sample B Female 19.2
Sample C Male 22.1
Sample D Male 19.7
Subiculum
nTPM: 25.0
Samples: 4

Max nTPM: 33.0
Min nTPM: 20.4
Sample A Female 33.0
Sample B Female 22.1
Sample C Male 24.3
Sample D Male 20.4
Ventral hippocampus
nTPM: 26.4
Samples: 4

Max nTPM: 34.7
Min nTPM: 19.7
Sample A Female 23.9
Sample B Female 19.7
Sample C Male 34.7
Sample D Male 27.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 30.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 29.9
Samples: 4

Max nTPM: 34.2
Min nTPM: 27.5
Sample A Male 30.0
Sample B Male 27.5
Sample C Female 27.8
Sample D Female 34.2
Hippocampal formation
nTPM: 30.4
Samples: 4

Max nTPM: 34.4
Min nTPM: 24.4
Sample A Male 24.4
Sample B Male 33.8
Sample C Female 34.4
Sample D Female 29.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.5
70546299 Antisense, RP_050623_04_A03, Mouse strain C57BL/6J (56 days, male) 4.5
74988615 Antisense, RP_060315_05_F08, Mouse strain C57BL/6J (56 days, male) 2.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.