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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:36.3 nTPM
HPA:36.3 nTPM
GTEx:43.0 nTPM
FANTOM5:48.5 Scaled Tags Per Million
Pig:7.6 nTPM
Mouse:32.4 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA009975
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 36.3
Sample id Sample description nTPM
Hippocampus
nTPM: 35.0
1898 Male, age 80, left hemisphere 37.2
2148 Female, age 91, left hemisphere 36.0
1855 Male, age 76, left hemisphere 35.2
2621 Female, age 67, right hemisphere 35.1
2529 Female, age 94, left hemisphere 33.2
1911 Female, age 85, right hemisphere 33.0
Dentate gyrus
nTPM: 34.0
2010 Male, age 76, both hemispheres 36.7
2530 Female, age 94, left hemisphere 35.9
2528 Male, age 74, both hemispheres 33.8
2246 Female, age 85, both hemispheres 33.5
1927 Female, age 91, both hemispheres 32.8
2531 Female, age 67, both hemispheres 31.5
Entorhinal gyrus
nTPM: 36.0
2117 Female, age 91, right hemisphere 39.4
2686 Male, age 75, right hemisphere 36.6
2764 Male, age 80, right hemisphere 36.6
1938 Female, age 85, left hemisphere 35.9
2613 Female, age 94, left hemisphere 34.8
1787 Male, age 76, left hemisphere 32.6
Hippocampus, CA1
nTPM: 36.3
2749 Male, age 80, left hemisphere 43.1
1873 Female, age 85, both hemispheres 36.5
2045 Male, age 76, both hemispheres 34.5
2082 Female, age 91, right hemisphere 33.8
2527 Male, age 74, both hemispheres 33.7
Hippocampus, CA2
nTPM: 34.4
1963 Male, age 80, left hemisphere 37.2
1892 Male, age 76, both hemispheres 36.5
1940 Female, age 85, left hemisphere 33.8
2249 Male, age 74, both hemispheres 33.8
2437 Female, age 94, left hemisphere 32.7
2113 Female, age 91, right hemisphere 32.4
Hippocampus, CA3
nTPM: 34.6
1867 Male, age 76, both hemispheres 36.8
2861 Female, age 67, both hemispheres 35.3
1891 Female, age 85, both hemispheres 34.7
2137 Male, age 80, left hemisphere 34.7
2620 Female, age 94, left hemisphere 33.9
2436 Male, age 74, both hemispheres 32.0
Parahippocampal cortex
nTPM: 34.1
1933 Female, age 85, both hemispheres 36.0
2245 Female, age 91, both hemispheres 36.0
2018 Male, age 76, both hemispheres 35.1
1850 Male, age 80, both hemispheres 34.6
2622 Female, age 67, right hemisphere 34.2
2692 Male, age 74, both hemispheres 34.2
1990 Female, age 91, right hemisphere 33.9
2532 Female, age 72, left hemisphere 33.8
2250 Female, age 67, right hemisphere 32.5
2693 Female, age 94, both hemispheres 31.2
Perirhinal gyrus
nTPM: 33.9
1794 Male, age 80, right hemisphere 35.8
1847 Female, age 91, left hemisphere 34.8
1841 Female, age 85, right hemisphere 34.2
2521 Female, age 94, right hemisphere 33.0
2848 Male, age 76, right hemisphere 31.6
Subiculum
nTPM: 34.5
2042 Male, age 76, both hemispheres 37.6
1901 Male, age 80, both hemispheres 37.4
1977 Female, age 85, both hemispheres 35.6
2729 Female, age 91, right hemisphere 33.7
2619 Male, age 74, both hemispheres 32.8
2438 Female, age 94, left hemisphere 29.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 43.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 43.0
Samples: 197

Max nTPM: 63.2
Min nTPM: 19.0
Std nTPM: 7.3
Median nTPM: 43.0
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 63.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 60.4
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 60.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 58.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 58.5
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 57.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 56.8
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 55.6
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 55.1
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 54.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 54.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 48.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 48.5
FF:10153-102I9 76 years, female 51.1
FF:10169-103B7 60 years, female 46.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 7.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 6.0
Samples: 4

Max nTPM: 6.4
Min nTPM: 5.6
Sample A Female 5.6
Sample B Female 6.4
Sample C Male 5.8
Sample D Male 6.3
Entorhinal cortex
nTPM: 7.6
Samples: 4

Max nTPM: 8.0
Min nTPM: 7.4
Sample A Female 7.6
Sample B Female 8.0
Sample C Male 7.4
Sample D Male 7.4
Subiculum
nTPM: 7.2
Samples: 4

Max nTPM: 7.7
Min nTPM: 6.7
Sample A Female 6.7
Sample B Female 7.7
Sample C Male 6.9
Sample D Male 7.3
Ventral hippocampus
nTPM: 6.5
Samples: 4

Max nTPM: 7.0
Min nTPM: 5.6
Sample A Female 5.6
Sample B Female 7.0
Sample C Male 6.4
Sample D Male 6.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 32.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 31.8
Samples: 4

Max nTPM: 36.4
Min nTPM: 28.7
Sample A Male 30.5
Sample B Male 31.4
Sample C Female 36.4
Sample D Female 28.7
Hippocampal formation
nTPM: 32.4
Samples: 4

Max nTPM: 35.9
Min nTPM: 30.1
Sample A Male 30.1
Sample B Male 31.7
Sample C Female 31.8
Sample D Female 35.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
71492808 Antisense, RP_050913_01_E12, Mouse strain C57BL/6J (56 days, male) 0.1

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