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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:8.2 nTPM
HPA:8.2 nTPM
GTEx:6.9 nTPM
FANTOM5:52.4 Scaled Tags Per Million
Pig:19.3 nTPM
Mouse:33.9 nTPM
Allen mouse:2.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036285
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 8.2
Sample id Sample description nTPM
Hippocampus
nTPM: 5.9
2621 Female, age 67, right hemisphere 8.4
1898 Male, age 80, left hemisphere 7.6
1911 Female, age 85, right hemisphere 7.0
2529 Female, age 94, left hemisphere 5.7
1855 Male, age 76, left hemisphere 3.7
2148 Female, age 91, left hemisphere 3.3
Dentate gyrus
nTPM: 6.1
1927 Female, age 91, both hemispheres 8.3
2530 Female, age 94, left hemisphere 7.2
2246 Female, age 85, both hemispheres 6.1
2531 Female, age 67, both hemispheres 5.8
2010 Male, age 76, both hemispheres 4.6
2528 Male, age 74, both hemispheres 4.4
Entorhinal gyrus
nTPM: 6.7
1938 Female, age 85, left hemisphere 11.1
1787 Male, age 76, left hemisphere 10.3
2764 Male, age 80, right hemisphere 7.7
2613 Female, age 94, left hemisphere 5.3
2686 Male, age 75, right hemisphere 3.7
2117 Female, age 91, right hemisphere 2.1
Hippocampus, CA1
nTPM: 6.8
2749 Male, age 80, left hemisphere 15.6
1873 Female, age 85, both hemispheres 5.8
2527 Male, age 74, both hemispheres 5.1
2045 Male, age 76, both hemispheres 4.7
2082 Female, age 91, right hemisphere 3.0
Hippocampus, CA2
nTPM: 6.5
1963 Male, age 80, left hemisphere 9.5
1940 Female, age 85, left hemisphere 8.6
1892 Male, age 76, both hemispheres 7.9
2437 Female, age 94, left hemisphere 5.3
2113 Female, age 91, right hemisphere 4.1
2249 Male, age 74, both hemispheres 3.8
Hippocampus, CA3
nTPM: 7.3
2137 Male, age 80, left hemisphere 12.5
2861 Female, age 67, both hemispheres 7.2
1867 Male, age 76, both hemispheres 6.8
2436 Male, age 74, both hemispheres 6.7
1891 Female, age 85, both hemispheres 5.9
2620 Female, age 94, left hemisphere 5.0
Parahippocampal cortex
nTPM: 6.0
1933 Female, age 85, both hemispheres 10.7
1850 Male, age 80, both hemispheres 7.9
2245 Female, age 91, both hemispheres 7.1
2693 Female, age 94, both hemispheres 6.6
2532 Female, age 72, left hemisphere 6.2
2250 Female, age 67, right hemisphere 5.9
2018 Male, age 76, both hemispheres 4.6
1990 Female, age 91, right hemisphere 4.3
2622 Female, age 67, right hemisphere 4.2
2692 Male, age 74, both hemispheres 2.6
Perirhinal gyrus
nTPM: 8.2
2848 Male, age 76, right hemisphere 10.3
1841 Female, age 85, right hemisphere 7.8
1847 Female, age 91, left hemisphere 7.7
2521 Female, age 94, right hemisphere 7.7
1794 Male, age 80, right hemisphere 7.6
Subiculum
nTPM: 5.8
1901 Male, age 80, both hemispheres 9.6
2729 Female, age 91, right hemisphere 6.3
1977 Female, age 85, both hemispheres 5.6
2042 Male, age 76, both hemispheres 5.0
2438 Female, age 94, left hemisphere 4.7
2619 Male, age 74, both hemispheres 3.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 6.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 6.9
Samples: 197

Max nTPM: 22.0
Min nTPM: 2.6
Std nTPM: 3.2
Median nTPM: 6.0
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 22.0
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 18.1
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 17.4
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 16.1
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 15.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 14.9
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 14.3
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 13.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 13.8
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 13.1
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 13.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 52.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 52.4
FF:10169-103B7 60 years, female 68.0
FF:10153-102I9 76 years, female 36.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.6
Samples: 4

Max nTPM: 22.3
Min nTPM: 13.8
Sample A Female 22.3
Sample B Female 20.1
Sample C Male 13.8
Sample D Male 18.0
Entorhinal cortex
nTPM: 19.3
Samples: 4

Max nTPM: 21.0
Min nTPM: 17.3
Sample A Female 21.0
Sample B Female 18.4
Sample C Male 20.3
Sample D Male 17.3
Subiculum
nTPM: 15.1
Samples: 4

Max nTPM: 19.0
Min nTPM: 13.2
Sample A Female 19.0
Sample B Female 13.7
Sample C Male 13.2
Sample D Male 14.5
Ventral hippocampus
nTPM: 15.2
Samples: 4

Max nTPM: 19.5
Min nTPM: 11.5
Sample A Female 15.8
Sample B Female 14.1
Sample C Male 11.5
Sample D Male 19.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 33.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 27.7
Samples: 4

Max nTPM: 30.7
Min nTPM: 25.0
Sample A Male 25.0
Sample B Male 27.0
Sample C Female 28.1
Sample D Female 30.7
Hippocampal formation
nTPM: 33.9
Samples: 4

Max nTPM: 36.3
Min nTPM: 29.4
Sample A Male 36.3
Sample B Male 36.2
Sample C Female 33.7
Sample D Female 29.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.1
73817986 Antisense, RP_051214_01_A11, Mouse strain C57BL/6J (56 days, male) 3.9
67792204 Antisense, RP_040920_01_D12, Mouse strain C57BL/6J (56 days, male) 0.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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