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ZCRB1
BASAL GANGLIA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:117.2 nTPM
HPA:117.2 nTPM
GTEx:91.9 nTPM
FANTOM5:116.4 Scaled Tags Per Million
Pig:13.1 nTPM
Mouse:56.9 nTPM
Allen mouse:0.1 Expression energy

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 117.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 106.4
2846 Female, age 79, unknown 112.7
2288 Male, age 75, left hemisphere 111.3
2290 Female, age 72, unknown 106.7
2481 Female, age 94, left hemisphere 106.6
1857 Female, age 85, left hemisphere 105.0
1854 Male, age 80, left hemisphere 104.1
1781 Male, age 74, unknown 102.6
2289 Male, age 61, right hemisphere 102.1
Claustrum
nTPM: 104.9
1956 Male, age 74, unknown 110.0
2196 Female, age 79, unknown 110.0
2292 Female, age 85, both hemispheres 107.8
2491 Male, age 75, both hemispheres 106.0
2392 Female, age 94, both hemispheres 105.1
2198 Male, age 80, both hemispheres 104.8
2568 Male, age 61, both hemispheres 101.9
2284 Female, age 91, both hemispheres 100.9
2645 Female, age 72, unknown 97.2
Globus pallidus, externus
nTPM: 117.2
1996 Male, age 80, right hemisphere 124.4
2567 Female, age 72, unknown 117.6
2772 Female, age 79, unknown 115.9
2395 Male, age 75, both hemispheres 114.0
2646 Male, age 61, right hemisphere 113.9
Globus pallidus, internus
nTPM: 116.8
2287 Male, age 75, right hemisphere 128.0
2483 Female, age 94, right hemisphere 120.8
2566 Female, age 72, unknown 115.0
2778 Female, age 91, both hemispheres 114.8
2037 Male, age 80, right hemisphere 114.3
2111 Female, age 85, right hemisphere 112.8
1818 Male, age 74, unknown 112.3
Nucleus accumbens
nTPM: 105.8
2698 Female, age 72, unknown 112.7
2391 Female, age 94, left hemisphere 110.8
2286 Male, age 75, left hemisphere 108.0
1806 Female, age 85, left hemisphere 106.1
1856 Female, age 91, right hemisphere 102.8
2732 Male, age 80, right hemisphere 102.7
1783 Male, age 74, unknown 102.1
2824 Male, age 61, right hemisphere 101.4
Nucleus basalis of Meynert
nTPM: 110.4
2569 Male, age 61, both hemispheres 118.7
2821 Male, age 75, both hemispheres 109.5
2393 Male, age 80, right hemisphere 107.6
2484 Female, age 94, left hemisphere 105.8
Nucleus of the diagonal band
nTPM: 104.4
1812 Female, age 91, both hemispheres 110.8
2195 Female, age 85, both hemispheres 105.1
2775 Male, age 80, right hemisphere 103.6
1979 Male, age 74, unknown 101.5
2029 Male, age 61, right hemisphere 100.9
Olfactory tubercle
nTPM: 102.5
1846 Male, age 80, right hemisphere 106.9
1998 Female, age 91, both hemispheres 101.6
2856 Male, age 75, right hemisphere 101.0
2487 Female, age 94, left hemisphere 100.3
Putamen
nTPM: 106.1
2482 Female, age 94, left hemisphere 109.6
1829 Male, age 74, unknown 108.5
2647 Male, age 75, left hemisphere 106.5
2489 Female, age 72, unknown 106.4
2466 Female, age 79, unknown 104.9
1838 Male, age 80, right hemisphere 103.6
1937 Female, age 91, right hemisphere 102.9
Septal nuclei
nTPM: 103.7
2629 Female, age 94, right hemisphere 108.2
1960 Male, age 74, unknown 105.0
2009 Female, age 91, both hemispheres 104.1
2199 Male, age 80, right hemisphere 103.8
2031 Female, age 72, unknown 103.6
2394 Male, age 61, left hemisphere 101.1
2059 Female, age 85, both hemispheres 99.8

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 91.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 77.3
Samples: 246

Max nTPM: 168.1
Min nTPM: 38.1
Std nTPM: 20.4
Median nTPM: 73.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 168.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 165.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 159.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 158.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 154.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 140.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 128.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 128.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 125.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 123.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 122.1
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 76.9
Samples: 246

Max nTPM: 182.6
Min nTPM: 40.0
Std nTPM: 20.6
Median nTPM: 72.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 182.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 156.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 148.9
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 145.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 136.4
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 136.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 132.0
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 128.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 127.2
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 123.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 117.0
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Brain - Putamen (basal ganglia)
Average nTPM: 91.9
Samples: 205

Max nTPM: 265.8
Min nTPM: 51.3
Std nTPM: 27.6
Median nTPM: 85.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 265.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 220.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 197.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 175.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 165.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 156.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 154.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 154.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 152.8
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 143.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 139.9
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 116.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 85.3
FF:10164-103B2 76 years, female 85.3
Globus pallidus
Scaled Tags Per Million: 116.4
FF:10161-103A8 76 years, female 127.9
FF:10175-103C4 60 years, female 104.9
Nucleus accumbens
Scaled Tags Per Million: 57.0
FF:10037-101F1 23-56 years, mixed 57.0
Putamen
Scaled Tags Per Million: 95.5
FF:10176-103C5 60 years, female 95.5

BASAL GANGLIA - Pig RNA-seqi
Average nTPM 13.1
Pig sample Sample description nTPM
Caudate
nTPM: 9.6
Samples: 4

Max nTPM: 10.4
Min nTPM: 8.5
Sample A Female 9.8
Sample B Female 8.5
Sample C Male 10.4
Sample D Male 9.8
Putamen
nTPM: 13.1
Samples: 4

Max nTPM: 16.1
Min nTPM: 11.1
Sample A Female 13.6
Sample B Female 11.1
Sample C Male 16.1
Sample D Male 11.6
Septum
nTPM: 11.7
Samples: 4

Max nTPM: 13.8
Min nTPM: 9.7
Sample A Female 11.7
Sample B Female 9.7
Sample C Male 13.8
Sample D Male 11.7
Ventral pallidum
nTPM: 10.8
Samples: 4

Max nTPM: 12.3
Min nTPM: 10.0
Sample A Female 10.4
Sample B Female 10.4
Sample C Male 12.3
Sample D Male 10.0

BASAL GANGLIA - Mouse RNA-seqi
Average nTPM 56.9
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 57.0
Samples: 4

Max nTPM: 61.5
Min nTPM: 52.4
Sample A Male 58.3
Sample B Male 52.4
Sample C Female 61.5
Sample D Female 55.6
Septum
nTPM: 55.8
Samples: 4

Max nTPM: 58.2
Min nTPM: 54.3
Sample A Male 55.0
Sample B Male 58.2
Sample C Female 55.6
Sample D Female 54.3
Ventral forebrain
nTPM: 55.3
Samples: 4

Max nTPM: 59.0
Min nTPM: 49.2
Sample A Male 58.8
Sample B Male 49.2
Sample C Female 59.0
Sample D Female 54.0

BASAL GANGLIA - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.0
68862150 Antisense, RP_050301_01_F05, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.1
68862150 Antisense, RP_050301_01_F05, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.