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PEX5
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:39.1 nTPM
HPA:39.1 nTPM
GTEx:48.3 nTPM
FANTOM5:18.4 Scaled Tags Per Million
Pig:10.8 nTPM
Mouse:31.2 nTPM
Allen mouse:2.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039259Antibody HPA039260
Glial cells HighMedium
Neuronal cells MediumHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 39.1
Sample id Sample description nTPM
Hippocampus
nTPM: 36.8
1898 Male, age 80, left hemisphere 38.2
2148 Female, age 91, left hemisphere 37.1
2529 Female, age 94, left hemisphere 36.8
2621 Female, age 67, right hemisphere 36.7
1855 Male, age 76, left hemisphere 35.9
1911 Female, age 85, right hemisphere 35.8
Dentate gyrus
nTPM: 37.5
2530 Female, age 94, left hemisphere 41.9
1927 Female, age 91, both hemispheres 39.7
2010 Male, age 76, both hemispheres 38.6
2531 Female, age 67, both hemispheres 36.6
2246 Female, age 85, both hemispheres 34.7
2528 Male, age 74, both hemispheres 33.5
Entorhinal gyrus
nTPM: 39.1
2686 Male, age 75, right hemisphere 42.5
2764 Male, age 80, right hemisphere 39.0
2613 Female, age 94, left hemisphere 38.7
2117 Female, age 91, right hemisphere 38.6
1938 Female, age 85, left hemisphere 38.1
1787 Male, age 76, left hemisphere 37.4
Hippocampus, CA1
nTPM: 36.8
2045 Male, age 76, both hemispheres 39.4
1873 Female, age 85, both hemispheres 37.9
2749 Male, age 80, left hemisphere 37.2
2082 Female, age 91, right hemisphere 35.4
2527 Male, age 74, both hemispheres 34.1
Hippocampus, CA2
nTPM: 37.0
1892 Male, age 76, both hemispheres 40.5
1963 Male, age 80, left hemisphere 39.3
2437 Female, age 94, left hemisphere 37.0
1940 Female, age 85, left hemisphere 36.3
2113 Female, age 91, right hemisphere 34.7
2249 Male, age 74, both hemispheres 34.2
Hippocampus, CA3
nTPM: 36.6
1867 Male, age 76, both hemispheres 42.2
2861 Female, age 67, both hemispheres 38.0
1891 Female, age 85, both hemispheres 37.9
2137 Male, age 80, left hemisphere 35.3
2620 Female, age 94, left hemisphere 34.9
2436 Male, age 74, both hemispheres 31.6
Parahippocampal cortex
nTPM: 36.7
1933 Female, age 85, both hemispheres 38.6
2622 Female, age 67, right hemisphere 37.8
1850 Male, age 80, both hemispheres 37.6
1990 Female, age 91, right hemisphere 37.6
2018 Male, age 76, both hemispheres 36.9
2245 Female, age 91, both hemispheres 36.8
2692 Male, age 74, both hemispheres 36.6
2532 Female, age 72, left hemisphere 36.2
2693 Female, age 94, both hemispheres 35.5
2250 Female, age 67, right hemisphere 33.5
Perirhinal gyrus
nTPM: 37.7
1841 Female, age 85, right hemisphere 40.4
1847 Female, age 91, left hemisphere 39.0
2848 Male, age 76, right hemisphere 38.6
1794 Male, age 80, right hemisphere 37.5
2521 Female, age 94, right hemisphere 32.6
Subiculum
nTPM: 36.3
2729 Female, age 91, right hemisphere 37.9
1977 Female, age 85, both hemispheres 37.5
1901 Male, age 80, both hemispheres 37.4
2042 Male, age 76, both hemispheres 36.2
2619 Male, age 74, both hemispheres 35.2
2438 Female, age 94, left hemisphere 33.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 48.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 48.3
Samples: 197

Max nTPM: 149.7
Min nTPM: 18.5
Std nTPM: 20.4
Median nTPM: 43.6
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 149.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 137.3
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 127.8
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 114.7
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 100.9
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 98.8
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 96.6
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 96.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 94.0
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 86.0
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 85.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 18.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 18.4
FF:10153-102I9 76 years, female 23.2
FF:10169-103B7 60 years, female 13.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 10.8
Samples: 4

Max nTPM: 12.1
Min nTPM: 8.8
Sample A Female 12.1
Sample B Female 12.0
Sample C Male 8.8
Sample D Male 10.1
Entorhinal cortex
nTPM: 8.2
Samples: 4

Max nTPM: 8.7
Min nTPM: 7.1
Sample A Female 8.4
Sample B Female 8.7
Sample C Male 8.6
Sample D Male 7.1
Subiculum
nTPM: 8.6
Samples: 4

Max nTPM: 10.5
Min nTPM: 7.7
Sample A Female 10.5
Sample B Female 8.2
Sample C Male 7.9
Sample D Male 7.7
Ventral hippocampus
nTPM: 9.5
Samples: 4

Max nTPM: 11.4
Min nTPM: 7.3
Sample A Female 9.1
Sample B Female 7.3
Sample C Male 11.4
Sample D Male 10.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 31.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 31.2
Samples: 4

Max nTPM: 33.4
Min nTPM: 30.0
Sample A Male 30.0
Sample B Male 31.0
Sample C Female 30.5
Sample D Female 33.4
Hippocampal formation
nTPM: 30.3
Samples: 4

Max nTPM: 32.0
Min nTPM: 28.5
Sample A Male 28.5
Sample B Male 29.2
Sample C Female 32.0
Sample D Female 31.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.6
68546287 Antisense, RP_050120_02_C08, Mouse strain C57BL/6J (56 days, male) 2.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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