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SLC7A1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:31.0 nTPM
HPA:31.0 nTPM
GTEx:13.8 nTPM
FANTOM5:25.1 Scaled Tags Per Million
Pig:13.4 nTPM
Mouse:12.6 nTPM
Allen mouse:1.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039721Antibody HPA077838
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 31.0
Sample id Sample description nTPM
Hippocampus
nTPM: 26.8
1898 Male, age 80, left hemisphere 30.9
1911 Female, age 85, right hemisphere 30.4
2621 Female, age 67, right hemisphere 28.3
1855 Male, age 76, left hemisphere 26.8
2529 Female, age 94, left hemisphere 22.9
2148 Female, age 91, left hemisphere 21.6
Dentate gyrus
nTPM: 26.0
2530 Female, age 94, left hemisphere 34.5
2010 Male, age 76, both hemispheres 30.3
1927 Female, age 91, both hemispheres 26.4
2531 Female, age 67, both hemispheres 24.4
2246 Female, age 85, both hemispheres 20.2
2528 Male, age 74, both hemispheres 19.9
Entorhinal gyrus
nTPM: 22.5
1787 Male, age 76, left hemisphere 27.9
2764 Male, age 80, right hemisphere 23.7
2686 Male, age 75, right hemisphere 22.6
1938 Female, age 85, left hemisphere 21.7
2613 Female, age 94, left hemisphere 20.9
2117 Female, age 91, right hemisphere 18.0
Hippocampus, CA1
nTPM: 31.0
2749 Male, age 80, left hemisphere 54.9
2527 Male, age 74, both hemispheres 28.1
1873 Female, age 85, both hemispheres 26.6
2082 Female, age 91, right hemisphere 25.3
2045 Male, age 76, both hemispheres 20.0
Hippocampus, CA2
nTPM: 29.2
1963 Male, age 80, left hemisphere 42.7
1892 Male, age 76, both hemispheres 30.3
2249 Male, age 74, both hemispheres 29.9
2437 Female, age 94, left hemisphere 27.9
2113 Female, age 91, right hemisphere 25.1
1940 Female, age 85, left hemisphere 19.3
Hippocampus, CA3
nTPM: 30.6
2137 Male, age 80, left hemisphere 39.9
2861 Female, age 67, both hemispheres 37.4
2436 Male, age 74, both hemispheres 32.9
1867 Male, age 76, both hemispheres 29.1
1891 Female, age 85, both hemispheres 22.6
2620 Female, age 94, left hemisphere 22.0
Parahippocampal cortex
nTPM: 21.6
1990 Female, age 91, right hemisphere 26.5
2622 Female, age 67, right hemisphere 22.6
2250 Female, age 67, right hemisphere 22.4
2018 Male, age 76, both hemispheres 22.0
2245 Female, age 91, both hemispheres 21.8
1933 Female, age 85, both hemispheres 21.6
2532 Female, age 72, left hemisphere 20.7
2692 Male, age 74, both hemispheres 19.8
1850 Male, age 80, both hemispheres 19.3
2693 Female, age 94, both hemispheres 19.1
Perirhinal gyrus
nTPM: 19.5
1847 Female, age 91, left hemisphere 21.7
1841 Female, age 85, right hemisphere 20.2
2521 Female, age 94, right hemisphere 19.3
2848 Male, age 76, right hemisphere 19.0
1794 Male, age 80, right hemisphere 17.3
Subiculum
nTPM: 22.6
1901 Male, age 80, both hemispheres 26.8
1977 Female, age 85, both hemispheres 26.0
2042 Male, age 76, both hemispheres 25.0
2619 Male, age 74, both hemispheres 21.0
2438 Female, age 94, left hemisphere 18.7
2729 Female, age 91, right hemisphere 18.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.8
Samples: 197

Max nTPM: 49.1
Min nTPM: 3.2
Std nTPM: 5.7
Median nTPM: 13.0
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 49.1
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 38.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 32.9
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 30.0
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 28.5
GTEX-1H3NZ-0011-R1a-SM-CKZP5 60-69 years, male 26.4
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 25.8
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 24.9
GTEX-14ASI-0011-R1b-SM-5S2TY 60-69 years, male 23.3
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 22.8
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 22.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 25.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 25.1
FF:10153-102I9 76 years, female 26.1
FF:10169-103B7 60 years, female 24.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 11.0
Samples: 4

Max nTPM: 13.2
Min nTPM: 7.5
Sample A Female 13.2
Sample B Female 11.4
Sample C Male 12.0
Sample D Male 7.5
Entorhinal cortex
nTPM: 11.3
Samples: 4

Max nTPM: 12.7
Min nTPM: 10.3
Sample A Female 11.6
Sample B Female 10.3
Sample C Male 12.7
Sample D Male 10.6
Subiculum
nTPM: 11.2
Samples: 4

Max nTPM: 13.6
Min nTPM: 9.2
Sample A Female 13.6
Sample B Female 9.2
Sample C Male 12.4
Sample D Male 9.5
Ventral hippocampus
nTPM: 13.4
Samples: 4

Max nTPM: 19.6
Min nTPM: 9.1
Sample A Female 14.2
Sample B Female 9.1
Sample C Male 19.6
Sample D Male 10.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.7
Samples: 4

Max nTPM: 15.3
Min nTPM: 10.4
Sample A Male 11.9
Sample B Male 13.0
Sample C Female 10.4
Sample D Female 15.3
Hippocampal formation
nTPM: 10.8
Samples: 4

Max nTPM: 12.6
Min nTPM: 9.2
Sample A Male 9.2
Sample B Male 12.1
Sample C Female 12.6
Sample D Female 9.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.5
69874036 Antisense, RP_050512_02_E07, Mouse strain C57BL/6J (56 days, male) 1.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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