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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:84.3 nTPM
HPA:84.3 nTPM
GTEx:74.6 nTPM
FANTOM5:89.0 Scaled Tags Per Million
Pig:78.7 nTPM
Mouse:140.8 nTPM
Allen mouse:8.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039700
Glial cells Low
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 84.3
Sample id Sample description nTPM
Hippocampus
nTPM: 82.3
1898 Male, age 80, left hemisphere 88.6
1911 Female, age 85, right hemisphere 84.2
2529 Female, age 94, left hemisphere 83.0
1855 Male, age 76, left hemisphere 82.2
2621 Female, age 67, right hemisphere 79.1
2148 Female, age 91, left hemisphere 76.5
Dentate gyrus
nTPM: 80.3
2010 Male, age 76, both hemispheres 88.4
2528 Male, age 74, both hemispheres 83.9
1927 Female, age 91, both hemispheres 80.4
2246 Female, age 85, both hemispheres 79.5
2530 Female, age 94, left hemisphere 76.1
2531 Female, age 67, both hemispheres 73.5
Entorhinal gyrus
nTPM: 78.9
1938 Female, age 85, left hemisphere 84.4
2117 Female, age 91, right hemisphere 82.8
2764 Male, age 80, right hemisphere 81.5
1787 Male, age 76, left hemisphere 79.7
2686 Male, age 75, right hemisphere 73.3
2613 Female, age 94, left hemisphere 71.9
Hippocampus, CA1
nTPM: 83.4
2749 Male, age 80, left hemisphere 89.2
1873 Female, age 85, both hemispheres 84.3
2527 Male, age 74, both hemispheres 82.7
2082 Female, age 91, right hemisphere 80.9
2045 Male, age 76, both hemispheres 79.9
Hippocampus, CA2
nTPM: 84.2
2249 Male, age 74, both hemispheres 93.4
1892 Male, age 76, both hemispheres 87.2
1963 Male, age 80, left hemisphere 83.3
1940 Female, age 85, left hemisphere 82.9
2113 Female, age 91, right hemisphere 81.4
2437 Female, age 94, left hemisphere 77.3
Hippocampus, CA3
nTPM: 81.6
2137 Male, age 80, left hemisphere 88.0
2436 Male, age 74, both hemispheres 86.0
1867 Male, age 76, both hemispheres 85.4
1891 Female, age 85, both hemispheres 83.3
2620 Female, age 94, left hemisphere 74.4
2861 Female, age 67, both hemispheres 72.3
Parahippocampal cortex
nTPM: 79.7
2018 Male, age 76, both hemispheres 85.8
1850 Male, age 80, both hemispheres 85.4
1990 Female, age 91, right hemisphere 82.5
2250 Female, age 67, right hemisphere 82.5
1933 Female, age 85, both hemispheres 81.3
2245 Female, age 91, both hemispheres 80.1
2693 Female, age 94, both hemispheres 77.5
2532 Female, age 72, left hemisphere 76.9
2692 Male, age 74, both hemispheres 73.2
2622 Female, age 67, right hemisphere 72.3
Perirhinal gyrus
nTPM: 84.3
1841 Female, age 85, right hemisphere 88.9
1847 Female, age 91, left hemisphere 86.4
1794 Male, age 80, right hemisphere 84.5
2848 Male, age 76, right hemisphere 81.5
2521 Female, age 94, right hemisphere 80.2
Subiculum
nTPM: 80.5
1901 Male, age 80, both hemispheres 83.2
1977 Female, age 85, both hemispheres 82.5
2729 Female, age 91, right hemisphere 82.0
2042 Male, age 76, both hemispheres 81.2
2619 Male, age 74, both hemispheres 78.6
2438 Female, age 94, left hemisphere 75.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 74.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 74.6
Samples: 197

Max nTPM: 139.8
Min nTPM: 47.6
Std nTPM: 13.7
Median nTPM: 73.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 139.8
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 122.0
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 117.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 112.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 106.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 106.0
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 103.6
GTEX-1HSKV-0011-R1b-SM-CMKH7 60-69 years, male 101.1
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 100.0
GTEX-1BAJH-0011-R1a-SM-7P8SV 70-79 years, male 99.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 99.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 89.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 89.0
FF:10169-103B7 60 years, female 97.3
FF:10153-102I9 76 years, female 80.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 78.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 78.7
Samples: 4

Max nTPM: 95.5
Min nTPM: 63.9
Sample A Female 95.5
Sample B Female 89.1
Sample C Male 63.9
Sample D Male 66.3
Entorhinal cortex
nTPM: 62.6
Samples: 4

Max nTPM: 88.0
Min nTPM: 44.4
Sample A Female 57.7
Sample B Female 88.0
Sample C Male 60.4
Sample D Male 44.4
Subiculum
nTPM: 61.2
Samples: 4

Max nTPM: 75.4
Min nTPM: 49.0
Sample A Female 75.4
Sample B Female 62.9
Sample C Male 49.0
Sample D Male 57.6
Ventral hippocampus
nTPM: 69.3
Samples: 4

Max nTPM: 79.2
Min nTPM: 63.2
Sample A Female 79.2
Sample B Female 64.8
Sample C Male 63.2
Sample D Male 70.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 140.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 133.3
Samples: 4

Max nTPM: 139.9
Min nTPM: 121.3
Sample A Male 121.3
Sample B Male 139.9
Sample C Female 137.1
Sample D Female 134.9
Hippocampal formation
nTPM: 140.8
Samples: 4

Max nTPM: 164.0
Min nTPM: 127.3
Sample A Male 164.0
Sample B Male 137.2
Sample C Female 134.5
Sample D Female 127.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.0
69672144 Antisense, RP_050428_03_B03, Mouse strain C57BL/6J (56 days, male) 8.0

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The Human Protein Atlas

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