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SLAIN1
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:156.3 nTPM
HPA:156.3 nTPM
GTEx:145.0 nTPM
FANTOM5:154.6 Scaled Tags Per Million
Pig:69.4 nTPM
Mouse:57.4 nTPM
Allen mouse:17.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 156.3
Sample id Sample description nTPM
Hippocampus
nTPM: 113.5
2529 Female, age 94, left hemisphere 136.5
1911 Female, age 85, right hemisphere 135.4
2621 Female, age 67, right hemisphere 113.8
1898 Male, age 80, left hemisphere 106.4
1855 Male, age 76, left hemisphere 95.2
2148 Female, age 91, left hemisphere 93.7
Dentate gyrus
nTPM: 114.6
2530 Female, age 94, left hemisphere 175.9
2010 Male, age 76, both hemispheres 121.5
2246 Female, age 85, both hemispheres 104.7
2531 Female, age 67, both hemispheres 103.6
2528 Male, age 74, both hemispheres 99.3
1927 Female, age 91, both hemispheres 82.3
Entorhinal gyrus
nTPM: 133.4
2117 Female, age 91, right hemisphere 172.4
2686 Male, age 75, right hemisphere 164.2
2764 Male, age 80, right hemisphere 127.6
2613 Female, age 94, left hemisphere 122.6
1938 Female, age 85, left hemisphere 113.3
1787 Male, age 76, left hemisphere 100.3
Hippocampus, CA1
nTPM: 95.0
2082 Female, age 91, right hemisphere 104.1
1873 Female, age 85, both hemispheres 103.9
2527 Male, age 74, both hemispheres 103.1
2749 Male, age 80, left hemisphere 93.8
2045 Male, age 76, both hemispheres 70.1
Hippocampus, CA2
nTPM: 113.2
1963 Male, age 80, left hemisphere 139.5
2437 Female, age 94, left hemisphere 126.2
2249 Male, age 74, both hemispheres 111.6
2113 Female, age 91, right hemisphere 110.3
1940 Female, age 85, left hemisphere 107.2
1892 Male, age 76, both hemispheres 84.2
Hippocampus, CA3
nTPM: 95.5
1891 Female, age 85, both hemispheres 160.0
1867 Male, age 76, both hemispheres 111.3
2137 Male, age 80, left hemisphere 91.4
2436 Male, age 74, both hemispheres 78.8
2861 Female, age 67, both hemispheres 69.2
2620 Female, age 94, left hemisphere 62.3
Parahippocampal cortex
nTPM: 111.3
2692 Male, age 74, both hemispheres 143.9
2532 Female, age 72, left hemisphere 141.5
2018 Male, age 76, both hemispheres 120.7
1990 Female, age 91, right hemisphere 116.1
1850 Male, age 80, both hemispheres 114.0
2245 Female, age 91, both hemispheres 109.0
1933 Female, age 85, both hemispheres 107.5
2693 Female, age 94, both hemispheres 95.8
2622 Female, age 67, right hemisphere 89.3
2250 Female, age 67, right hemisphere 75.2
Perirhinal gyrus
nTPM: 85.5
2848 Male, age 76, right hemisphere 93.5
1841 Female, age 85, right hemisphere 86.0
1847 Female, age 91, left hemisphere 85.0
2521 Female, age 94, right hemisphere 82.9
1794 Male, age 80, right hemisphere 80.2
Subiculum
nTPM: 156.3
2042 Male, age 76, both hemispheres 208.6
2438 Female, age 94, left hemisphere 194.0
1901 Male, age 80, both hemispheres 166.6
1977 Female, age 85, both hemispheres 148.9
2619 Male, age 74, both hemispheres 111.7
2729 Female, age 91, right hemisphere 108.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 145.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 145.0
Samples: 197

Max nTPM: 414.1
Min nTPM: 34.4
Std nTPM: 81.4
Median nTPM: 124.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 414.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 413.3
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 391.5
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 370.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 362.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 359.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 349.9
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 331.6
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 315.0
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 314.9
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 306.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 154.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 154.6
FF:10153-102I9 76 years, female 187.9
FF:10169-103B7 60 years, female 121.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 69.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 69.5
Samples: 4

Max nTPM: 96.9
Min nTPM: 32.6
Sample A Female 90.3
Sample B Female 58.0
Sample C Male 96.9
Sample D Male 32.6
Entorhinal cortex
nTPM: 27.8
Samples: 4

Max nTPM: 37.5
Min nTPM: 21.4
Sample A Female 21.4
Sample B Female 37.5
Sample C Male 23.5
Sample D Male 28.7
Subiculum
nTPM: 33.8
Samples: 4

Max nTPM: 39.4
Min nTPM: 27.7
Sample A Female 34.1
Sample B Female 39.4
Sample C Male 27.7
Sample D Male 34.0
Ventral hippocampus
nTPM: 47.1
Samples: 4

Max nTPM: 70.0
Min nTPM: 30.2
Sample A Female 47.6
Sample B Female 30.2
Sample C Male 40.5
Sample D Male 70.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 57.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 39.3
Samples: 4

Max nTPM: 50.1
Min nTPM: 33.4
Sample A Male 50.1
Sample B Male 37.3
Sample C Female 36.4
Sample D Female 33.4
Hippocampal formation
nTPM: 57.4
Samples: 4

Max nTPM: 73.4
Min nTPM: 47.5
Sample A Male 47.5
Sample B Male 55.5
Sample C Female 73.4
Sample D Female 53.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.4
68080699 Antisense, RP_040929_01_F07, Mouse strain C57BL/6J (56 days, male) 17.4

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The Human Protein Atlas

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