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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:698.1 nTPM
HPA:698.1 nTPM
GTEx:559.8 nTPM
FANTOM5:222.0 Scaled Tags Per Million
Pig:227.3 nTPM
Mouse:166.4 nTPM
Allen mouse:1.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 698.1
Sample id Sample description nTPM
Hippocampus
nTPM: 684.2
1898 Male, age 80, left hemisphere 703.3
2529 Female, age 94, left hemisphere 685.5
1855 Male, age 76, left hemisphere 685.1
2148 Female, age 91, left hemisphere 680.5
1911 Female, age 85, right hemisphere 676.7
2621 Female, age 67, right hemisphere 674.3
Dentate gyrus
nTPM: 673.6
2530 Female, age 94, left hemisphere 696.4
2010 Male, age 76, both hemispheres 683.0
2528 Male, age 74, both hemispheres 672.1
1927 Female, age 91, both hemispheres 667.0
2531 Female, age 67, both hemispheres 661.6
2246 Female, age 85, both hemispheres 661.4
Entorhinal gyrus
nTPM: 675.2
2117 Female, age 91, right hemisphere 705.8
2764 Male, age 80, right hemisphere 674.8
1938 Female, age 85, left hemisphere 674.2
1787 Male, age 76, left hemisphere 673.6
2686 Male, age 75, right hemisphere 666.0
2613 Female, age 94, left hemisphere 656.8
Hippocampus, CA1
nTPM: 679.1
2749 Male, age 80, left hemisphere 712.9
1873 Female, age 85, both hemispheres 685.0
2082 Female, age 91, right hemisphere 670.0
2527 Male, age 74, both hemispheres 664.8
2045 Male, age 76, both hemispheres 662.5
Hippocampus, CA2
nTPM: 688.2
1963 Male, age 80, left hemisphere 728.5
2249 Male, age 74, both hemispheres 703.1
1892 Male, age 76, both hemispheres 680.0
1940 Female, age 85, left hemisphere 673.8
2113 Female, age 91, right hemisphere 672.8
2437 Female, age 94, left hemisphere 671.1
Hippocampus, CA3
nTPM: 698.1
2436 Male, age 74, both hemispheres 809.1
1867 Male, age 76, both hemispheres 694.2
2137 Male, age 80, left hemisphere 688.1
1891 Female, age 85, both hemispheres 676.3
2620 Female, age 94, left hemisphere 662.9
2861 Female, age 67, both hemispheres 658.1
Parahippocampal cortex
nTPM: 661.6
2018 Male, age 76, both hemispheres 682.2
1933 Female, age 85, both hemispheres 675.1
1990 Female, age 91, right hemisphere 666.1
1850 Male, age 80, both hemispheres 662.8
2245 Female, age 91, both hemispheres 660.9
2250 Female, age 67, right hemisphere 660.2
2532 Female, age 72, left hemisphere 660.1
2622 Female, age 67, right hemisphere 653.3
2692 Male, age 74, both hemispheres 652.7
2693 Female, age 94, both hemispheres 643.1
Perirhinal gyrus
nTPM: 660.5
1794 Male, age 80, right hemisphere 672.7
1847 Female, age 91, left hemisphere 666.1
1841 Female, age 85, right hemisphere 663.2
2521 Female, age 94, right hemisphere 652.8
2848 Male, age 76, right hemisphere 647.8
Subiculum
nTPM: 672.2
1977 Female, age 85, both hemispheres 683.2
1901 Male, age 80, both hemispheres 681.9
2042 Male, age 76, both hemispheres 680.6
2729 Female, age 91, right hemisphere 676.6
2619 Male, age 74, both hemispheres 671.1
2438 Female, age 94, left hemisphere 639.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 559.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 559.8
Samples: 197

Max nTPM: 1228.9
Min nTPM: 236.5
Std nTPM: 158.3
Median nTPM: 534.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1228.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 1073.8
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 1065.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1047.3
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 985.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 936.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 875.8
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 862.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 854.5
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 845.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 841.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 222.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 222.0
FF:10169-103B7 60 years, female 285.6
FF:10153-102I9 76 years, female 158.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 227.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 227.3
Samples: 4

Max nTPM: 330.0
Min nTPM: 157.4
Sample A Female 330.0
Sample B Female 192.0
Sample C Male 229.7
Sample D Male 157.4
Entorhinal cortex
nTPM: 187.5
Samples: 4

Max nTPM: 217.9
Min nTPM: 139.1
Sample A Female 189.6
Sample B Female 203.2
Sample C Male 217.9
Sample D Male 139.1
Subiculum
nTPM: 166.7
Samples: 4

Max nTPM: 216.3
Min nTPM: 134.4
Sample A Female 216.3
Sample B Female 152.5
Sample C Male 134.4
Sample D Male 163.6
Ventral hippocampus
nTPM: 197.5
Samples: 4

Max nTPM: 239.6
Min nTPM: 159.5
Sample A Female 209.7
Sample B Female 159.5
Sample C Male 239.6
Sample D Male 181.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 166.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 164.0
Samples: 4

Max nTPM: 175.4
Min nTPM: 146.4
Sample A Male 166.3
Sample B Male 167.8
Sample C Female 175.4
Sample D Female 146.4
Hippocampal formation
nTPM: 166.4
Samples: 4

Max nTPM: 180.4
Min nTPM: 144.1
Sample A Male 170.2
Sample B Male 144.1
Sample C Female 170.7
Sample D Female 180.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.5
69873558 Antisense, RP_050512_01_E06, Mouse strain C57BL/6J (56 days, male) 1.5

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