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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:247.8 nTPM
HPA:247.8 nTPM
GTEx:247.1 nTPM
FANTOM5:235.5 Scaled Tags Per Million
Pig:156.2 nTPM
Mouse:413.8 nTPM
Allen mouse:26.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA015996
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 247.8
Sample id Sample description nTPM
Hippocampus
nTPM: 243.9
1898 Male, age 80, left hemisphere 265.6
1855 Male, age 76, left hemisphere 254.5
2529 Female, age 94, left hemisphere 242.4
2148 Female, age 91, left hemisphere 240.9
2621 Female, age 67, right hemisphere 230.5
1911 Female, age 85, right hemisphere 229.8
Dentate gyrus
nTPM: 234.4
2528 Male, age 74, both hemispheres 253.1
2010 Male, age 76, both hemispheres 246.1
2246 Female, age 85, both hemispheres 239.7
2530 Female, age 94, left hemisphere 234.3
1927 Female, age 91, both hemispheres 229.2
2531 Female, age 67, both hemispheres 204.1
Entorhinal gyrus
nTPM: 231.3
2117 Female, age 91, right hemisphere 265.0
1938 Female, age 85, left hemisphere 237.8
1787 Male, age 76, left hemisphere 233.3
2764 Male, age 80, right hemisphere 229.2
2686 Male, age 75, right hemisphere 211.4
2613 Female, age 94, left hemisphere 210.8
Hippocampus, CA1
nTPM: 247.1
2749 Male, age 80, left hemisphere 263.5
2527 Male, age 74, both hemispheres 250.8
1873 Female, age 85, both hemispheres 246.7
2045 Male, age 76, both hemispheres 239.7
2082 Female, age 91, right hemisphere 234.9
Hippocampus, CA2
nTPM: 239.6
2249 Male, age 74, both hemispheres 252.2
1963 Male, age 80, left hemisphere 247.9
1892 Male, age 76, both hemispheres 241.4
1940 Female, age 85, left hemisphere 236.3
2113 Female, age 91, right hemisphere 233.2
2437 Female, age 94, left hemisphere 226.3
Hippocampus, CA3
nTPM: 233.1
2436 Male, age 74, both hemispheres 250.2
2137 Male, age 80, left hemisphere 240.1
1891 Female, age 85, both hemispheres 239.4
1867 Male, age 76, both hemispheres 234.8
2620 Female, age 94, left hemisphere 223.6
2861 Female, age 67, both hemispheres 210.6
Parahippocampal cortex
nTPM: 233.1
1850 Male, age 80, both hemispheres 257.2
2250 Female, age 67, right hemisphere 243.5
2692 Male, age 74, both hemispheres 237.2
1933 Female, age 85, both hemispheres 236.2
2018 Male, age 76, both hemispheres 233.9
1990 Female, age 91, right hemisphere 233.3
2245 Female, age 91, both hemispheres 227.2
2693 Female, age 94, both hemispheres 225.0
2622 Female, age 67, right hemisphere 220.3
2532 Female, age 72, left hemisphere 216.6
Perirhinal gyrus
nTPM: 247.8
1794 Male, age 80, right hemisphere 266.8
1847 Female, age 91, left hemisphere 257.8
1841 Female, age 85, right hemisphere 250.3
2521 Female, age 94, right hemisphere 235.9
2848 Male, age 76, right hemisphere 228.5
Subiculum
nTPM: 239.5
2729 Female, age 91, right hemisphere 257.7
2619 Male, age 74, both hemispheres 238.6
1901 Male, age 80, both hemispheres 238.5
1977 Female, age 85, both hemispheres 237.4
2438 Female, age 94, left hemisphere 234.9
2042 Male, age 76, both hemispheres 230.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 247.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 247.1
Samples: 197

Max nTPM: 421.6
Min nTPM: 121.1
Std nTPM: 50.5
Median nTPM: 244.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 421.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 370.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 364.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 357.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 354.0
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 353.6
GTEX-1HSKV-0011-R1b-SM-CMKH7 60-69 years, male 352.5
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 349.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 343.2
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 340.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 336.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 235.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 235.5
FF:10153-102I9 76 years, female 238.7
FF:10169-103B7 60 years, female 232.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 156.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 156.2
Samples: 4

Max nTPM: 195.3
Min nTPM: 118.7
Sample A Female 195.3
Sample B Female 159.6
Sample C Male 151.0
Sample D Male 118.7
Entorhinal cortex
nTPM: 145.1
Samples: 4

Max nTPM: 166.8
Min nTPM: 112.7
Sample A Female 155.5
Sample B Female 166.8
Sample C Male 145.3
Sample D Male 112.7
Subiculum
nTPM: 137.2
Samples: 4

Max nTPM: 162.7
Min nTPM: 122.9
Sample A Female 162.7
Sample B Female 122.9
Sample C Male 130.3
Sample D Male 132.9
Ventral hippocampus
nTPM: 146.8
Samples: 4

Max nTPM: 171.6
Min nTPM: 113.4
Sample A Female 171.6
Sample B Female 113.4
Sample C Male 165.2
Sample D Male 136.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 413.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 380.6
Samples: 4

Max nTPM: 395.0
Min nTPM: 371.3
Sample A Male 371.3
Sample B Male 383.9
Sample C Female 395.0
Sample D Female 372.2
Hippocampal formation
nTPM: 413.8
Samples: 4

Max nTPM: 433.8
Min nTPM: 386.5
Sample A Male 433.8
Sample B Male 386.5
Sample C Female 421.5
Sample D Female 413.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 26.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 26.0
71489783 Antisense, RP_050512_04_E11, Mouse strain C57BL/6J (56 days, male) 26.0

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