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DNAJA4
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:73.3 nTPM
HPA:73.3 nTPM
GTEx:63.7 nTPM
FANTOM5:83.5 Scaled Tags Per Million
Pig:46.8 nTPM
Mouse:19.4 nTPM
Allen mouse:0.5 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 73.3
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 66.4
2666 Male, age 74, left hemisphere 120.9
2219 Male, age 76, both hemispheres 79.6
2411 Female, age 72, unknown 68.4
1827 Male, age 72, unknown 64.4
1870 Female, age 42, unknown 61.2
1833 Male, age 53, unknown 58.6
2586 Male, age 75, left hemisphere 56.2
1830 Male, age 51, unknown 55.1
2828 Female, age 72, unknown 53.8
2019 Male, age 18, unknown 45.5
Dorsal raphe nucleus
nTPM: 63.6
2298 Female, age 72, unknown 75.6
2047 Male, age 72, unknown 68.1
1828 Male, age 53, unknown 63.3
2016 Female, age 72, unknown 57.5
2750 Male, age 76, both hemispheres 53.3
Inferior colliculus
nTPM: 59.6
2849 Male, age 72, unknown 62.2
1848 Female, age 42, unknown 60.7
2097 Female, age 72, unknown 59.7
1890 Male, age 53, unknown 55.8
Median raphe nucleus
nTPM: 73.3
2220 Male, age 76, midline 73.3
Pedunculopontine tegmental nucleus
nTPM: 66.9
2334 Male, age 80, both hemispheres 77.7
1921 Female, age 85, both hemispheres 66.9
2338 Male, age 61, both hemispheres 56.1
Periaquaductal grey, anterior
nTPM: 66.1
1947 Male, age 18, unknown 80.2
1795 Male, age 51, unknown 63.8
2502 Female, age 75, unknown 54.2
Periaquaductal grey, dorsal
nTPM: 57.5
1840 Male, age 53, unknown 67.7
2464 Female, age 72, unknown 59.3
2850 Male, age 76, both hemispheres 51.8
1831 Male, age 72, unknown 51.2
Periaquaductal grey, lateral
nTPM: 53.4
2053 Male, age 18, unknown 58.7
2272 Male, age 74, both hemispheres 53.3
2140 Male, age 76, both hemispheres 48.2
Pretectal area
nTPM: 58.3
1816 Male, age 51, unknown 66.2
2825 Male, age 18, unknown 65.3
2224 Female, age 72, unknown 64.7
1944 Female, age 72, unknown 62.0
2407 Male, age 75, both hemispheres 59.8
1815 Male, age 53, unknown 59.6
2007 Male, age 72, unknown 58.8
1817 Female, age 42, unknown 58.6
2667 Female, age 75, unknown 53.2
2273 Male, age 74, both hemispheres 50.9
2316 Male, age 76, right hemisphere 42.6
Red nucleus
nTPM: 50.9
2584 Male, age 75, left hemisphere 60.6
1821 Female, age 72, unknown 58.5
2725 Female, age 75, unknown 54.9
1954 Female, age 42, unknown 53.6
2227 Male, age 72, unknown 51.5
2503 Female, age 72, unknown 51.5
2769 Male, age 72, unknown 51.3
2588 Male, age 74, left hemisphere 49.2
1865 Male, age 51, unknown 46.0
1904 Male, age 53, unknown 46.0
2785 Male, age 18, unknown 46.0
2823 Male, age 76, right hemisphere 41.3
Substantia nigra
nTPM: 67.0
2241 Male, age 72, unknown 81.5
1916 Female, age 42, unknown 77.5
1851 Male, age 51, unknown 71.3
2583 Male, age 75, right hemisphere 68.4
1889 Female, age 72, unknown 67.9
1941 Male, age 53, unknown 66.2
2409 Female, age 72, unknown 64.7
2699 Male, age 18, unknown 64.6
2665 Male, age 74, both hemispheres 56.6
2590 Female, age 75, unknown 51.0
Superior colliculus
nTPM: 58.6
2668 Female, age 75, unknown 91.4
1796 Male, age 53, unknown 65.7
1839 Male, age 51, unknown 61.0
2261 Male, age 18, unknown 60.3
2087 Female, age 72, unknown 57.6
2664 Male, age 75, both hemispheres 52.8
2587 Male, age 74, left hemisphere 52.0
1895 Male, age 76, right hemisphere 50.7
1913 Female, age 42, unknown 50.4
1995 Male, age 72, unknown 44.3
Ventral tegmental area
nTPM: 62.8
2410 Female, age 72, unknown 73.7
1915 Female, age 42, unknown 68.2
1942 Male, age 51, unknown 61.0
2218 Male, age 76, both hemispheres 59.3
2223 Female, age 72, unknown 58.9
2021 Male, age 53, unknown 55.8

MIDBRAIN - GTEx RNA-seqi
Average nTPM 63.7
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 63.7
Samples: 139

Max nTPM: 347.2
Min nTPM: 20.3
Std nTPM: 47.1
Median nTPM: 49.8
GTEX-13OVJ-0011-R2b-SM-5L3GP 50-59 years, female 347.2
GTEX-OXRO-0011-R2A-SM-3NB1W 60-69 years, female 261.9
GTEX-11TUW-0011-R2b-SM-DO92T 60-69 years, male 254.9
GTEX-12WSH-0011-R2a-SM-5GU68 50-59 years, male 197.3
GTEX-13PDP-0011-R2b-SM-5O9DH 60-69 years, male 174.6
GTEX-1B996-0011-R2a-SM-7IGON 60-69 years, male 158.3
GTEX-13O3Q-0011-R2b-SM-5KM3K 50-59 years, male 146.3
GTEX-1B8SG-0011-R2b-SM-79OOT 50-59 years, male 142.1
GTEX-WHSE-0011-R2A-SM-3P5ZL 20-29 years, male 141.5
GTEX-1HB9E-0011-R2b-SM-A96RW 50-59 years, male 137.0
GTEX-1313W-0011-R2a-SM-5EGLF 50-59 years, female 136.4
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 83.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 83.5
FF:10158-103A5 76 years, female 83.5

MIDBRAIN - Pig RNA-seqi
Average nTPM 46.8
Pig sample Sample description nTPM
Midbrain
nTPM: 44.7
Samples: 4

Max nTPM: 66.5
Min nTPM: 23.2
Sample A Female 23.2
Sample B Female 39.1
Sample C Male 66.5
Sample D Male 49.8
Periaqueductal gray
nTPM: 46.8
Samples: 3

Max nTPM: 55.8
Min nTPM: 41.6
Sample B Female 43.0
Sample C Male 55.8
Sample D Male 41.6
Substantia nigra
nTPM: 43.3
Samples: 4

Max nTPM: 63.3
Min nTPM: 19.7
Sample A Female 57.9
Sample B Female 32.3
Sample C Male 63.3
Sample D Male 19.7
Superior colliculi
nTPM: 45.4
Samples: 4

Max nTPM: 53.8
Min nTPM: 32.1
Sample A Female 50.3
Sample B Female 32.1
Sample C Male 53.8
Sample D Male 45.5

MIDBRAIN - Mouse RNA-seqi
Average nTPM 19.4
Mouse sample Sample description nTPM
Midbrain
nTPM: 19.4
Samples: 4

Max nTPM: 19.9
Min nTPM: 18.5
Sample A Male 18.5
Sample B Male 19.9
Sample C Female 19.7
Sample D Female 19.4

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 0.5
70744391 Antisense, RP_050725_02_B06, Mouse strain C57BL/6J (56 days, male) 0.8
67814214 Antisense, RP_040920_01_G02, Mouse strain C57BL/6J (56 days, male) 0.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
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