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DNAJA4
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:68.6 nTPM
HPA:68.6 nTPM
GTEx:52.4 nTPM
FANTOM5:147.6 Scaled Tags Per Million
Pig:40.4 nTPM
Mouse:38.2 nTPM
Allen mouse:3.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041790Antibody CAB004646
Glial cells MediumLow
Neuronal cells HighLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 68.6
Sample id Sample description nTPM
Hippocampus
nTPM: 55.8
1855 Male, age 76, left hemisphere 63.1
1898 Male, age 80, left hemisphere 61.7
2529 Female, age 94, left hemisphere 58.2
2621 Female, age 67, right hemisphere 55.2
2148 Female, age 91, left hemisphere 50.6
1911 Female, age 85, right hemisphere 46.1
Dentate gyrus
nTPM: 56.3
2010 Male, age 76, both hemispheres 65.7
1927 Female, age 91, both hemispheres 62.8
2246 Female, age 85, both hemispheres 55.2
2530 Female, age 94, left hemisphere 55.1
2531 Female, age 67, both hemispheres 52.0
2528 Male, age 74, both hemispheres 47.1
Entorhinal gyrus
nTPM: 53.7
1787 Male, age 76, left hemisphere 62.4
2764 Male, age 80, right hemisphere 60.1
1938 Female, age 85, left hemisphere 58.5
2686 Male, age 75, right hemisphere 50.2
2117 Female, age 91, right hemisphere 45.9
2613 Female, age 94, left hemisphere 44.9
Hippocampus, CA1
nTPM: 65.0
2045 Male, age 76, both hemispheres 83.1
2749 Male, age 80, left hemisphere 79.6
1873 Female, age 85, both hemispheres 57.1
2082 Female, age 91, right hemisphere 54.7
2527 Male, age 74, both hemispheres 50.4
Hippocampus, CA2
nTPM: 61.7
1892 Male, age 76, both hemispheres 87.6
1940 Female, age 85, left hemisphere 66.9
1963 Male, age 80, left hemisphere 59.8
2113 Female, age 91, right hemisphere 54.1
2437 Female, age 94, left hemisphere 52.1
2249 Male, age 74, both hemispheres 49.5
Hippocampus, CA3
nTPM: 59.8
1867 Male, age 76, both hemispheres 84.1
2137 Male, age 80, left hemisphere 78.3
2861 Female, age 67, both hemispheres 52.6
2620 Female, age 94, left hemisphere 50.1
1891 Female, age 85, both hemispheres 47.2
2436 Male, age 74, both hemispheres 46.2
Parahippocampal cortex
nTPM: 57.8
1850 Male, age 80, both hemispheres 68.1
2250 Female, age 67, right hemisphere 64.2
2245 Female, age 91, both hemispheres 63.7
2018 Male, age 76, both hemispheres 63.1
1933 Female, age 85, both hemispheres 59.8
1990 Female, age 91, right hemisphere 56.7
2532 Female, age 72, left hemisphere 56.7
2693 Female, age 94, both hemispheres 49.9
2692 Male, age 74, both hemispheres 48.7
2622 Female, age 67, right hemisphere 46.7
Perirhinal gyrus
nTPM: 68.6
1847 Female, age 91, left hemisphere 80.4
2848 Male, age 76, right hemisphere 74.3
1794 Male, age 80, right hemisphere 72.2
1841 Female, age 85, right hemisphere 61.3
2521 Female, age 94, right hemisphere 54.9
Subiculum
nTPM: 56.3
2042 Male, age 76, both hemispheres 71.0
1901 Male, age 80, both hemispheres 62.3
1977 Female, age 85, both hemispheres 58.5
2438 Female, age 94, left hemisphere 55.2
2619 Male, age 74, both hemispheres 47.7
2729 Female, age 91, right hemisphere 43.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 52.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 52.4
Samples: 197

Max nTPM: 378.7
Min nTPM: 16.9
Std nTPM: 37.7
Median nTPM: 42.4
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 378.7
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 210.8
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 206.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 179.3
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 167.4
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 157.3
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 148.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 144.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 114.8
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 114.8
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 105.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 147.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 147.6
FF:10153-102I9 76 years, female 150.9
FF:10169-103B7 60 years, female 144.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 40.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 36.6
Samples: 4

Max nTPM: 41.7
Min nTPM: 26.3
Sample A Female 40.5
Sample B Female 37.7
Sample C Male 41.7
Sample D Male 26.3
Entorhinal cortex
nTPM: 40.4
Samples: 4

Max nTPM: 42.0
Min nTPM: 36.2
Sample A Female 41.9
Sample B Female 42.0
Sample C Male 41.5
Sample D Male 36.2
Subiculum
nTPM: 32.8
Samples: 4

Max nTPM: 39.2
Min nTPM: 29.7
Sample A Female 39.2
Sample B Female 29.7
Sample C Male 29.7
Sample D Male 32.5
Ventral hippocampus
nTPM: 34.3
Samples: 4

Max nTPM: 42.0
Min nTPM: 25.5
Sample A Female 29.1
Sample B Female 25.5
Sample C Male 42.0
Sample D Male 40.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 38.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 29.9
Samples: 4

Max nTPM: 33.1
Min nTPM: 27.6
Sample A Male 27.6
Sample B Male 33.1
Sample C Female 28.5
Sample D Female 30.2
Hippocampal formation
nTPM: 38.2
Samples: 4

Max nTPM: 41.8
Min nTPM: 35.3
Sample A Male 36.3
Sample B Male 39.4
Sample C Female 41.8
Sample D Female 35.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.8
67814214 Antisense, RP_040920_01_G02, Mouse strain C57BL/6J (56 days, male) 4.2
70744391 Antisense, RP_050725_02_B06, Mouse strain C57BL/6J (56 days, male) 3.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.