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MAP1LC3B
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:105.2 nTPM
HPA:105.2 nTPM
GTEx:87.9 nTPM
FANTOM5:249.5 Scaled Tags Per Million
Pig:142.4 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA052474Antibody HPA052484Antibody HPA053767Antibody CAB037216
Glial cells Not detectedLowLowNot detected
Neuronal cells HighHighLowMedium









HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 105.2
Sample id Sample description nTPM
Hippocampus
nTPM: 101.5
1898 Male, age 80, left hemisphere 112.1
1855 Male, age 76, left hemisphere 103.5
2529 Female, age 94, left hemisphere 99.9
2621 Female, age 67, right hemisphere 98.2
1911 Female, age 85, right hemisphere 97.8
2148 Female, age 91, left hemisphere 97.5
Dentate gyrus
nTPM: 100.2
2010 Male, age 76, both hemispheres 105.8
2530 Female, age 94, left hemisphere 105.3
1927 Female, age 91, both hemispheres 102.6
2528 Male, age 74, both hemispheres 99.6
2246 Female, age 85, both hemispheres 97.8
2531 Female, age 67, both hemispheres 90.0
Entorhinal gyrus
nTPM: 99.0
2117 Female, age 91, right hemisphere 104.4
2764 Male, age 80, right hemisphere 102.1
1787 Male, age 76, left hemisphere 100.5
1938 Female, age 85, left hemisphere 99.7
2686 Male, age 75, right hemisphere 94.7
2613 Female, age 94, left hemisphere 92.7
Hippocampus, CA1
nTPM: 103.3
2749 Male, age 80, left hemisphere 114.2
1873 Female, age 85, both hemispheres 105.2
2045 Male, age 76, both hemispheres 102.8
2527 Male, age 74, both hemispheres 101.4
2082 Female, age 91, right hemisphere 92.8
Hippocampus, CA2
nTPM: 101.0
1892 Male, age 76, both hemispheres 107.6
1963 Male, age 80, left hemisphere 107.5
2249 Male, age 74, both hemispheres 103.0
2437 Female, age 94, left hemisphere 100.1
2113 Female, age 91, right hemisphere 94.4
1940 Female, age 85, left hemisphere 93.4
Hippocampus, CA3
nTPM: 101.2
1867 Male, age 76, both hemispheres 108.5
2436 Male, age 74, both hemispheres 108.1
2137 Male, age 80, left hemisphere 103.4
1891 Female, age 85, both hemispheres 99.5
2620 Female, age 94, left hemisphere 95.8
2861 Female, age 67, both hemispheres 91.9
Parahippocampal cortex
nTPM: 101.6
1850 Male, age 80, both hemispheres 109.5
2532 Female, age 72, left hemisphere 103.4
2250 Female, age 67, right hemisphere 103.3
1990 Female, age 91, right hemisphere 103.1
2245 Female, age 91, both hemispheres 101.2
1933 Female, age 85, both hemispheres 101.0
2692 Male, age 74, both hemispheres 100.5
2693 Female, age 94, both hemispheres 99.4
2018 Male, age 76, both hemispheres 99.2
2622 Female, age 67, right hemisphere 95.3
Perirhinal gyrus
nTPM: 105.2
1841 Female, age 85, right hemisphere 108.5
1794 Male, age 80, right hemisphere 108.3
1847 Female, age 91, left hemisphere 104.7
2521 Female, age 94, right hemisphere 103.0
2848 Male, age 76, right hemisphere 101.6
Subiculum
nTPM: 100.4
2438 Female, age 94, left hemisphere 108.0
1901 Male, age 80, both hemispheres 103.1
1977 Female, age 85, both hemispheres 100.0
2619 Male, age 74, both hemispheres 98.1
2729 Female, age 91, right hemisphere 97.2
2042 Male, age 76, both hemispheres 95.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 87.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 87.9
Samples: 197

Max nTPM: 178.4
Min nTPM: 44.9
Std nTPM: 16.2
Median nTPM: 85.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 178.4
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 138.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 132.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 122.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 121.8
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 120.7
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 118.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 115.3
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 114.2
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 113.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 112.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 249.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 249.5
FF:10153-102I9 76 years, female 260.4
FF:10169-103B7 60 years, female 238.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 142.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 142.4
Samples: 4

Max nTPM: 185.0
Min nTPM: 106.1
Sample A Female 185.0
Sample B Female 132.7
Sample C Male 145.6
Sample D Male 106.1
Entorhinal cortex
nTPM: 125.7
Samples: 4

Max nTPM: 140.9
Min nTPM: 110.0
Sample A Female 124.9
Sample B Female 140.9
Sample C Male 126.8
Sample D Male 110.0
Subiculum
nTPM: 123.4
Samples: 4

Max nTPM: 153.0
Min nTPM: 107.5
Sample A Female 153.0
Sample B Female 119.8
Sample C Male 113.4
Sample D Male 107.5
Ventral hippocampus
nTPM: 127.7
Samples: 4

Max nTPM: 147.4
Min nTPM: 97.3
Sample A Female 143.1
Sample B Female 97.3
Sample C Male 147.4
Sample D Male 122.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.