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RHOT2
BASAL GANGLIA - Expression summary
Protein expression
Caudatei
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:28.4 nTPM
HPA:28.4 nTPM
GTEx:27.4 nTPM
FANTOM5:28.7 Scaled Tags Per Million
Mouse:36.1 nTPM
Allen mouse:10.3 Expression energy

CAUDATE - Antibody stainingi
Antibody HPA012624Antibody HPA012895
Glial cells Not detectedNot detected
Neuronal cells LowMedium





BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 28.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 27.6
2290 Female, age 72, unknown 28.3
2481 Female, age 94, left hemisphere 28.1
1854 Male, age 80, left hemisphere 27.9
2846 Female, age 79, unknown 27.8
1857 Female, age 85, left hemisphere 27.5
2289 Male, age 61, right hemisphere 27.4
1781 Male, age 74, unknown 27.1
2288 Male, age 75, left hemisphere 27.1
Claustrum
nTPM: 27.7
2568 Male, age 61, both hemispheres 28.6
2645 Female, age 72, unknown 28.5
2284 Female, age 91, both hemispheres 28.0
2491 Male, age 75, both hemispheres 27.9
1956 Male, age 74, unknown 27.8
2198 Male, age 80, both hemispheres 27.8
2292 Female, age 85, both hemispheres 27.8
2196 Female, age 79, unknown 27.1
2392 Female, age 94, both hemispheres 26.0
Globus pallidus, externus
nTPM: 27.5
2772 Female, age 79, unknown 28.8
2567 Female, age 72, unknown 27.8
1996 Male, age 80, right hemisphere 27.6
2646 Male, age 61, right hemisphere 26.7
2395 Male, age 75, both hemispheres 26.4
Globus pallidus, internus
nTPM: 28.1
2037 Male, age 80, right hemisphere 28.9
2111 Female, age 85, right hemisphere 28.6
2483 Female, age 94, right hemisphere 28.5
2778 Female, age 91, both hemispheres 28.4
2287 Male, age 75, right hemisphere 27.8
1818 Male, age 74, unknown 27.6
2566 Female, age 72, unknown 26.7
Nucleus accumbens
nTPM: 27.2
1783 Male, age 74, unknown 28.3
2286 Male, age 75, left hemisphere 28.3
2824 Male, age 61, right hemisphere 28.2
1856 Female, age 91, right hemisphere 27.5
2732 Male, age 80, right hemisphere 27.3
1806 Female, age 85, left hemisphere 27.1
2391 Female, age 94, left hemisphere 25.9
2698 Female, age 72, unknown 25.4
Nucleus basalis of Meynert
nTPM: 27.3
2484 Female, age 94, left hemisphere 29.0
2569 Male, age 61, both hemispheres 27.3
2393 Male, age 80, right hemisphere 26.6
2821 Male, age 75, both hemispheres 26.1
Nucleus of the diagonal band
nTPM: 27.9
2775 Male, age 80, right hemisphere 29.3
2029 Male, age 61, right hemisphere 28.4
1812 Female, age 91, both hemispheres 27.4
1979 Male, age 74, unknown 27.2
2195 Female, age 85, both hemispheres 27.2
Olfactory tubercle
nTPM: 28.4
1998 Female, age 91, both hemispheres 28.8
2487 Female, age 94, left hemisphere 28.7
2856 Male, age 75, right hemisphere 28.6
1846 Male, age 80, right hemisphere 27.5
Putamen
nTPM: 27.6
2482 Female, age 94, left hemisphere 28.9
2466 Female, age 79, unknown 28.6
1838 Male, age 80, right hemisphere 27.8
2647 Male, age 75, left hemisphere 27.7
2489 Female, age 72, unknown 27.1
1829 Male, age 74, unknown 26.9
1937 Female, age 91, right hemisphere 26.1
Septal nuclei
nTPM: 27.7
2031 Female, age 72, unknown 28.9
1960 Male, age 74, unknown 28.5
2059 Female, age 85, both hemispheres 28.5
2009 Female, age 91, both hemispheres 27.7
2199 Male, age 80, right hemisphere 27.1
2394 Male, age 61, left hemisphere 27.1
2629 Female, age 94, right hemisphere 25.7

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 27.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 25.7
Samples: 246

Max nTPM: 42.9
Min nTPM: 8.5
Std nTPM: 5.7
Median nTPM: 25.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 42.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 42.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 40.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 39.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 38.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 38.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 37.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 37.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 37.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 37.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 37.0
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 27.4
Samples: 246

Max nTPM: 49.9
Min nTPM: 12.3
Std nTPM: 6.8
Median nTPM: 27.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 49.9
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 48.1
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 46.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 46.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 43.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 43.2
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 42.4
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 40.2
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 40.1
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 40.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 39.8
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Brain - Putamen (basal ganglia)
Average nTPM: 27.1
Samples: 205

Max nTPM: 43.2
Min nTPM: 12.4
Std nTPM: 5.8
Median nTPM: 27.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 43.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 41.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 41.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 38.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 38.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 38.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 37.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 37.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 37.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 36.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 36.1
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 28.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 28.7
FF:10164-103B2 76 years, female 28.7
Globus pallidus
Scaled Tags Per Million: 16.5
FF:10161-103A8 76 years, female 22.0
FF:10175-103C4 60 years, female 11.0
Nucleus accumbens
Scaled Tags Per Million: 20.2
FF:10037-101F1 23-56 years, mixed 20.2
Putamen
Scaled Tags Per Million: 27.6
FF:10176-103C5 60 years, female 27.6

BASAL GANGLIA - Mouse RNA-seqi
Average nTPM 36.1
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 36.1
Samples: 4

Max nTPM: 43.7
Min nTPM: 31.8
Sample A Male 33.9
Sample B Male 43.7
Sample C Female 31.8
Sample D Female 35.1
Septum
nTPM: 25.6
Samples: 4

Max nTPM: 26.1
Min nTPM: 24.5
Sample A Male 25.6
Sample B Male 26.1
Sample C Female 24.5
Sample D Female 26.0
Ventral forebrain
nTPM: 30.3
Samples: 4

Max nTPM: 31.1
Min nTPM: 28.4
Sample A Male 30.7
Sample B Male 31.1
Sample C Female 30.9
Sample D Female 28.4

BASAL GANGLIA - Allen Mouse ISHi
Max Expression energy 10.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 10.3
67815938 Antisense, RP_040920_02_B02, Mouse strain C57BL/6J (56 days, male) 10.3
Pallidum
Expression energy: 8.5
67815938 Antisense, RP_040920_02_B02, Mouse strain C57BL/6J (56 days, male) 8.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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