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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:29.8 nTPM
HPA:29.8 nTPM
GTEx:32.9 nTPM
FANTOM5:40.6 Scaled Tags Per Million
Pig:40.6 nTPM
Mouse:92.8 nTPM
Allen mouse:2.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA021997
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 29.8
Sample id Sample description nTPM
Hippocampus
nTPM: 27.9
1898 Male, age 80, left hemisphere 32.5
2621 Female, age 67, right hemisphere 28.6
1855 Male, age 76, left hemisphere 28.1
2148 Female, age 91, left hemisphere 27.2
1911 Female, age 85, right hemisphere 26.3
2529 Female, age 94, left hemisphere 24.5
Dentate gyrus
nTPM: 28.4
1927 Female, age 91, both hemispheres 33.0
2010 Male, age 76, both hemispheres 29.6
2530 Female, age 94, left hemisphere 27.4
2528 Male, age 74, both hemispheres 27.0
2246 Female, age 85, both hemispheres 26.8
2531 Female, age 67, both hemispheres 26.8
Entorhinal gyrus
nTPM: 27.1
1938 Female, age 85, left hemisphere 29.5
2764 Male, age 80, right hemisphere 28.5
1787 Male, age 76, left hemisphere 26.5
2613 Female, age 94, left hemisphere 26.4
2686 Male, age 75, right hemisphere 25.8
2117 Female, age 91, right hemisphere 25.6
Hippocampus, CA1
nTPM: 29.8
2749 Male, age 80, left hemisphere 35.7
1873 Female, age 85, both hemispheres 30.4
2045 Male, age 76, both hemispheres 28.8
2527 Male, age 74, both hemispheres 27.7
2082 Female, age 91, right hemisphere 26.5
Hippocampus, CA2
nTPM: 28.2
1892 Male, age 76, both hemispheres 34.0
1963 Male, age 80, left hemisphere 30.9
2249 Male, age 74, both hemispheres 28.2
1940 Female, age 85, left hemisphere 26.6
2113 Female, age 91, right hemisphere 25.7
2437 Female, age 94, left hemisphere 23.7
Hippocampus, CA3
nTPM: 28.4
2137 Male, age 80, left hemisphere 31.5
1867 Male, age 76, both hemispheres 30.0
2620 Female, age 94, left hemisphere 28.4
1891 Female, age 85, both hemispheres 28.2
2436 Male, age 74, both hemispheres 27.4
2861 Female, age 67, both hemispheres 24.7
Parahippocampal cortex
nTPM: 27.3
1850 Male, age 80, both hemispheres 30.3
1990 Female, age 91, right hemisphere 29.1
2693 Female, age 94, both hemispheres 28.9
1933 Female, age 85, both hemispheres 28.3
2250 Female, age 67, right hemisphere 27.6
2018 Male, age 76, both hemispheres 27.3
2245 Female, age 91, both hemispheres 26.6
2692 Male, age 74, both hemispheres 25.9
2532 Female, age 72, left hemisphere 25.4
2622 Female, age 67, right hemisphere 23.8
Perirhinal gyrus
nTPM: 29.4
1794 Male, age 80, right hemisphere 30.7
1841 Female, age 85, right hemisphere 30.3
1847 Female, age 91, left hemisphere 30.1
2521 Female, age 94, right hemisphere 29.7
2848 Male, age 76, right hemisphere 26.3
Subiculum
nTPM: 27.0
1901 Male, age 80, both hemispheres 30.0
1977 Female, age 85, both hemispheres 27.7
2729 Female, age 91, right hemisphere 26.8
2042 Male, age 76, both hemispheres 26.7
2619 Male, age 74, both hemispheres 26.5
2438 Female, age 94, left hemisphere 24.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 32.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 32.9
Samples: 197

Max nTPM: 58.4
Min nTPM: 14.1
Std nTPM: 8.3
Median nTPM: 30.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 58.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 57.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 56.2
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 53.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 52.9
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 52.6
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 49.9
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 49.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 49.3
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 48.5
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 48.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 40.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 40.6
FF:10169-103B7 60 years, female 51.2
FF:10153-102I9 76 years, female 30.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 40.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 40.7
Samples: 4

Max nTPM: 47.5
Min nTPM: 33.6
Sample A Female 47.5
Sample B Female 40.9
Sample C Male 40.6
Sample D Male 33.6
Entorhinal cortex
nTPM: 29.1
Samples: 4

Max nTPM: 31.8
Min nTPM: 25.8
Sample A Female 25.8
Sample B Female 31.0
Sample C Male 31.8
Sample D Male 27.6
Subiculum
nTPM: 31.1
Samples: 4

Max nTPM: 36.3
Min nTPM: 27.0
Sample A Female 36.3
Sample B Female 29.2
Sample C Male 31.8
Sample D Male 27.0
Ventral hippocampus
nTPM: 38.0
Samples: 4

Max nTPM: 48.2
Min nTPM: 26.3
Sample A Female 32.9
Sample B Female 26.3
Sample C Male 44.5
Sample D Male 48.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 92.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 83.2
Samples: 4

Max nTPM: 89.2
Min nTPM: 80.7
Sample A Male 81.4
Sample B Male 81.3
Sample C Female 89.2
Sample D Female 80.7
Hippocampal formation
nTPM: 92.8
Samples: 4

Max nTPM: 108.0
Min nTPM: 82.4
Sample A Male 108.0
Sample B Male 82.4
Sample C Female 89.2
Sample D Female 91.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.0
69568932 Antisense, RP_050426_03_B04, Mouse strain C57BL/6J (56 days, male) 2.0

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The Human Protein Atlas

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