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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:33.4 nTPM
HPA:33.4 nTPM
GTEx:31.5 nTPM
FANTOM5:26.2 Scaled Tags Per Million
Pig:18.7 nTPM
Mouse:17.4 nTPM
Allen mouse:8.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA060760
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 33.4
Sample id Sample description nTPM
Hippocampus
nTPM: 30.7
1898 Male, age 80, left hemisphere 32.3
2621 Female, age 67, right hemisphere 32.0
2529 Female, age 94, left hemisphere 31.5
1911 Female, age 85, right hemisphere 30.0
2148 Female, age 91, left hemisphere 29.7
1855 Male, age 76, left hemisphere 28.5
Dentate gyrus
nTPM: 31.0
2530 Female, age 94, left hemisphere 34.6
2531 Female, age 67, both hemispheres 32.7
1927 Female, age 91, both hemispheres 31.6
2010 Male, age 76, both hemispheres 31.2
2246 Female, age 85, both hemispheres 28.9
2528 Male, age 74, both hemispheres 27.1
Entorhinal gyrus
nTPM: 33.4
2613 Female, age 94, left hemisphere 36.9
2686 Male, age 75, right hemisphere 36.7
2764 Male, age 80, right hemisphere 35.7
1938 Female, age 85, left hemisphere 30.8
2117 Female, age 91, right hemisphere 30.5
1787 Male, age 76, left hemisphere 30.2
Hippocampus, CA1
nTPM: 31.1
2749 Male, age 80, left hemisphere 36.2
2082 Female, age 91, right hemisphere 30.8
1873 Female, age 85, both hemispheres 30.6
2527 Male, age 74, both hemispheres 29.3
2045 Male, age 76, both hemispheres 28.7
Hippocampus, CA2
nTPM: 29.8
1963 Male, age 80, left hemisphere 31.7
1892 Male, age 76, both hemispheres 31.6
2113 Female, age 91, right hemisphere 30.5
2437 Female, age 94, left hemisphere 30.3
1940 Female, age 85, left hemisphere 27.8
2249 Male, age 74, both hemispheres 26.6
Hippocampus, CA3
nTPM: 31.9
2620 Female, age 94, left hemisphere 36.9
2137 Male, age 80, left hemisphere 34.7
2861 Female, age 67, both hemispheres 34.1
1867 Male, age 76, both hemispheres 31.6
1891 Female, age 85, both hemispheres 29.3
2436 Male, age 74, both hemispheres 24.8
Parahippocampal cortex
nTPM: 30.7
2622 Female, age 67, right hemisphere 35.5
2692 Male, age 74, both hemispheres 32.1
2245 Female, age 91, both hemispheres 31.7
2532 Female, age 72, left hemisphere 31.2
1850 Male, age 80, both hemispheres 30.9
2693 Female, age 94, both hemispheres 30.3
2018 Male, age 76, both hemispheres 30.0
1990 Female, age 91, right hemisphere 29.6
1933 Female, age 85, both hemispheres 28.6
2250 Female, age 67, right hemisphere 27.4
Perirhinal gyrus
nTPM: 30.7
1794 Male, age 80, right hemisphere 33.4
1847 Female, age 91, left hemisphere 31.2
2848 Male, age 76, right hemisphere 31.0
1841 Female, age 85, right hemisphere 30.1
2521 Female, age 94, right hemisphere 28.0
Subiculum
nTPM: 30.6
2042 Male, age 76, both hemispheres 33.7
1901 Male, age 80, both hemispheres 33.1
1977 Female, age 85, both hemispheres 29.8
2619 Male, age 74, both hemispheres 29.8
2438 Female, age 94, left hemisphere 29.1
2729 Female, age 91, right hemisphere 28.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 31.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 31.5
Samples: 197

Max nTPM: 51.8
Min nTPM: 16.6
Std nTPM: 6.8
Median nTPM: 30.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 51.8
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 51.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 50.5
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 48.7
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 46.0
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 45.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 45.1
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 44.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 44.3
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 44.1
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 43.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 26.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.2
FF:10169-103B7 60 years, female 29.2
FF:10153-102I9 76 years, female 23.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.5
Samples: 4

Max nTPM: 23.4
Min nTPM: 13.6
Sample A Female 23.4
Sample B Female 18.7
Sample C Male 18.4
Sample D Male 13.6
Entorhinal cortex
nTPM: 16.7
Samples: 4

Max nTPM: 18.7
Min nTPM: 14.4
Sample A Female 18.7
Sample B Female 14.4
Sample C Male 18.2
Sample D Male 15.6
Subiculum
nTPM: 17.6
Samples: 4

Max nTPM: 22.3
Min nTPM: 14.5
Sample A Female 22.3
Sample B Female 15.5
Sample C Male 18.0
Sample D Male 14.5
Ventral hippocampus
nTPM: 18.7
Samples: 4

Max nTPM: 24.2
Min nTPM: 13.2
Sample A Female 17.0
Sample B Female 13.2
Sample C Male 24.2
Sample D Male 20.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.6
Samples: 4

Max nTPM: 19.2
Min nTPM: 14.9
Sample A Male 14.9
Sample B Male 15.5
Sample C Female 16.7
Sample D Female 19.2
Hippocampal formation
nTPM: 17.4
Samples: 4

Max nTPM: 18.3
Min nTPM: 15.5
Sample A Male 15.5
Sample B Male 18.3
Sample C Female 17.9
Sample D Female 18.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.6
69015518 Antisense, RP_050315_01_B06, Mouse strain C57BL/6J (56 days, male) 8.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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