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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:63.8 nTPM
HPA:63.8 nTPM
GTEx:69.5 nTPM
FANTOM5:111.4 Scaled Tags Per Million
Pig:47.1 nTPM
Mouse:31.0 nTPM
Allen mouse:13.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 63.8
Sample id Sample description nTPM
Hippocampus
nTPM: 63.2
2621 Female, age 67, right hemisphere 82.3
1855 Male, age 76, left hemisphere 64.4
1898 Male, age 80, left hemisphere 63.7
2148 Female, age 91, left hemisphere 58.8
1911 Female, age 85, right hemisphere 57.4
2529 Female, age 94, left hemisphere 52.8
Dentate gyrus
nTPM: 61.7
2530 Female, age 94, left hemisphere 75.1
2010 Male, age 76, both hemispheres 65.6
1927 Female, age 91, both hemispheres 64.1
2531 Female, age 67, both hemispheres 58.1
2246 Female, age 85, both hemispheres 56.4
2528 Male, age 74, both hemispheres 51.0
Entorhinal gyrus
nTPM: 53.8
2613 Female, age 94, left hemisphere 61.9
1787 Male, age 76, left hemisphere 55.9
2117 Female, age 91, right hemisphere 52.9
2764 Male, age 80, right hemisphere 52.1
1938 Female, age 85, left hemisphere 50.5
2686 Male, age 75, right hemisphere 49.2
Hippocampus, CA1
nTPM: 63.8
2749 Male, age 80, left hemisphere 85.5
1873 Female, age 85, both hemispheres 62.8
2045 Male, age 76, both hemispheres 60.1
2082 Female, age 91, right hemisphere 56.7
2527 Male, age 74, both hemispheres 54.1
Hippocampus, CA2
nTPM: 59.3
1963 Male, age 80, left hemisphere 68.1
1892 Male, age 76, both hemispheres 62.9
2437 Female, age 94, left hemisphere 60.1
1940 Female, age 85, left hemisphere 60.0
2113 Female, age 91, right hemisphere 54.4
2249 Male, age 74, both hemispheres 50.5
Hippocampus, CA3
nTPM: 60.9
2137 Male, age 80, left hemisphere 73.9
2861 Female, age 67, both hemispheres 73.4
2620 Female, age 94, left hemisphere 59.8
1867 Male, age 76, both hemispheres 59.2
1891 Female, age 85, both hemispheres 50.1
2436 Male, age 74, both hemispheres 49.0
Parahippocampal cortex
nTPM: 54.6
2245 Female, age 91, both hemispheres 63.1
2018 Male, age 76, both hemispheres 58.2
2693 Female, age 94, both hemispheres 58.2
2250 Female, age 67, right hemisphere 57.7
2622 Female, age 67, right hemisphere 54.9
1850 Male, age 80, both hemispheres 52.3
2532 Female, age 72, left hemisphere 52.2
1933 Female, age 85, both hemispheres 51.1
2692 Male, age 74, both hemispheres 49.3
1990 Female, age 91, right hemisphere 48.9
Perirhinal gyrus
nTPM: 55.0
2521 Female, age 94, right hemisphere 58.6
1847 Female, age 91, left hemisphere 55.3
2848 Male, age 76, right hemisphere 55.1
1841 Female, age 85, right hemisphere 53.2
1794 Male, age 80, right hemisphere 52.7
Subiculum
nTPM: 54.8
2042 Male, age 76, both hemispheres 62.5
1901 Male, age 80, both hemispheres 58.4
2729 Female, age 91, right hemisphere 54.9
2438 Female, age 94, left hemisphere 54.2
2619 Male, age 74, both hemispheres 51.0
1977 Female, age 85, both hemispheres 47.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 69.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 69.5
Samples: 197

Max nTPM: 143.7
Min nTPM: 25.7
Std nTPM: 23.8
Median nTPM: 64.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 143.7
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 137.7
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 128.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 128.1
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 125.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 122.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 122.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 121.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 118.9
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 117.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 116.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 111.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 111.4
FF:10169-103B7 60 years, female 118.2
FF:10153-102I9 76 years, female 104.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 47.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 47.1
Samples: 4

Max nTPM: 64.0
Min nTPM: 37.9
Sample A Female 64.0
Sample B Female 45.5
Sample C Male 41.0
Sample D Male 37.9
Entorhinal cortex
nTPM: 39.1
Samples: 4

Max nTPM: 42.2
Min nTPM: 32.9
Sample A Female 41.2
Sample B Female 40.0
Sample C Male 42.2
Sample D Male 32.9
Subiculum
nTPM: 40.5
Samples: 4

Max nTPM: 55.0
Min nTPM: 33.9
Sample A Female 55.0
Sample B Female 36.9
Sample C Male 36.3
Sample D Male 33.9
Ventral hippocampus
nTPM: 41.7
Samples: 4

Max nTPM: 50.3
Min nTPM: 30.7
Sample A Female 38.6
Sample B Female 30.7
Sample C Male 47.3
Sample D Male 50.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 31.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 25.2
Samples: 4

Max nTPM: 31.5
Min nTPM: 22.8
Sample A Male 23.1
Sample B Male 22.8
Sample C Female 31.5
Sample D Female 23.2
Hippocampal formation
nTPM: 31.0
Samples: 4

Max nTPM: 34.8
Min nTPM: 28.5
Sample A Male 34.8
Sample B Male 29.7
Sample C Female 28.5
Sample D Female 30.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.0
71992067 Antisense, RP_051012_04_A12, Mouse strain C57BL/6J (56 days, male) 13.0

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The Human Protein Atlas

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