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WDR45B
BASAL GANGLIA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:56.1 nTPM
HPA:56.1 nTPM
GTEx:49.4 nTPM
FANTOM5:133.6 Scaled Tags Per Million
Mouse:67.3 nTPM
Allen mouse:0.3 Expression energy

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 56.1
Sample id Sample description nTPM
Caudate nucleus
nTPM: 47.5
2481 Female, age 94, left hemisphere 50.7
1857 Female, age 85, left hemisphere 49.3
1854 Male, age 80, left hemisphere 48.2
2288 Male, age 75, left hemisphere 47.1
2290 Female, age 72, unknown 46.8
2846 Female, age 79, unknown 46.5
2289 Male, age 61, right hemisphere 45.9
1781 Male, age 74, unknown 45.3
Claustrum
nTPM: 47.8
1956 Male, age 74, unknown 50.1
2491 Male, age 75, both hemispheres 49.0
2392 Female, age 94, both hemispheres 48.4
2292 Female, age 85, both hemispheres 48.2
2196 Female, age 79, unknown 47.6
2198 Male, age 80, both hemispheres 47.5
2645 Female, age 72, unknown 46.7
2568 Male, age 61, both hemispheres 46.3
2284 Female, age 91, both hemispheres 46.1
Globus pallidus, externus
nTPM: 55.9
1996 Male, age 80, right hemisphere 59.2
2646 Male, age 61, right hemisphere 59.0
2772 Female, age 79, unknown 56.0
2567 Female, age 72, unknown 55.8
2395 Male, age 75, both hemispheres 49.7
Globus pallidus, internus
nTPM: 56.1
2483 Female, age 94, right hemisphere 60.3
2111 Female, age 85, right hemisphere 56.8
2778 Female, age 91, both hemispheres 56.5
1818 Male, age 74, unknown 55.9
2287 Male, age 75, right hemisphere 55.6
2566 Female, age 72, unknown 54.7
2037 Male, age 80, right hemisphere 52.9
Nucleus accumbens
nTPM: 49.4
2391 Female, age 94, left hemisphere 55.3
2286 Male, age 75, left hemisphere 51.5
2698 Female, age 72, unknown 49.8
2824 Male, age 61, right hemisphere 48.9
2732 Male, age 80, right hemisphere 48.2
1806 Female, age 85, left hemisphere 47.7
1783 Male, age 74, unknown 47.2
1856 Female, age 91, right hemisphere 47.0
Nucleus basalis of Meynert
nTPM: 50.3
2569 Male, age 61, both hemispheres 64.1
2484 Female, age 94, left hemisphere 47.2
2393 Male, age 80, right hemisphere 46.5
2821 Male, age 75, both hemispheres 43.4
Nucleus of the diagonal band
nTPM: 47.0
1812 Female, age 91, both hemispheres 48.6
2775 Male, age 80, right hemisphere 47.8
1979 Male, age 74, unknown 46.6
2195 Female, age 85, both hemispheres 46.2
2029 Male, age 61, right hemisphere 45.6
Olfactory tubercle
nTPM: 46.5
1846 Male, age 80, right hemisphere 49.4
2856 Male, age 75, right hemisphere 47.4
2487 Female, age 94, left hemisphere 45.0
1998 Female, age 91, both hemispheres 44.0
Putamen
nTPM: 48.1
2482 Female, age 94, left hemisphere 55.2
2647 Male, age 75, left hemisphere 53.6
2489 Female, age 72, unknown 47.5
1937 Female, age 91, right hemisphere 45.6
1829 Male, age 74, unknown 45.3
2466 Female, age 79, unknown 45.1
1838 Male, age 80, right hemisphere 44.6
Septal nuclei
nTPM: 45.9
2394 Male, age 61, left hemisphere 49.2
1960 Male, age 74, unknown 47.5
2059 Female, age 85, both hemispheres 46.3
2199 Male, age 80, right hemisphere 46.3
2031 Female, age 72, unknown 46.2
2009 Female, age 91, both hemispheres 43.1
2629 Female, age 94, right hemisphere 42.7

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 49.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 45.7
Samples: 246

Max nTPM: 107.9
Min nTPM: 29.6
Std nTPM: 8.5
Median nTPM: 44.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 107.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 75.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 73.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 73.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 64.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 63.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 63.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 63.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 61.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 61.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 60.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 46.4
Samples: 246

Max nTPM: 74.6
Min nTPM: 25.6
Std nTPM: 8.7
Median nTPM: 45.8
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 74.6
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 73.6
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 72.9
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 69.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 68.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 66.4
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 65.2
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 63.8
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 62.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 61.9
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 61.9
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Brain - Putamen (basal ganglia)
Average nTPM: 49.4
Samples: 205

Max nTPM: 90.6
Min nTPM: 31.1
Std nTPM: 9.7
Median nTPM: 48.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 90.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 86.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 79.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 78.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 76.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 72.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 71.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 71.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 70.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 69.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 67.6
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 133.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 102.8
FF:10164-103B2 76 years, female 102.8
Globus pallidus
Scaled Tags Per Million: 133.6
FF:10175-103C4 60 years, female 140.5
FF:10161-103A8 76 years, female 126.8
Nucleus accumbens
Scaled Tags Per Million: 70.4
FF:10037-101F1 23-56 years, mixed 70.4
Putamen
Scaled Tags Per Million: 73.6
FF:10176-103C5 60 years, female 73.6

BASAL GANGLIA - Mouse RNA-seqi
Average nTPM 67.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 62.4
Samples: 4

Max nTPM: 66.6
Min nTPM: 59.4
Sample A Male 62.3
Sample B Male 66.6
Sample C Female 59.4
Sample D Female 61.3
Septum
nTPM: 67.4
Samples: 4

Max nTPM: 73.9
Min nTPM: 60.5
Sample A Male 67.7
Sample B Male 67.3
Sample C Female 73.9
Sample D Female 60.5
Ventral forebrain
nTPM: 65.1
Samples: 4

Max nTPM: 66.8
Min nTPM: 61.6
Sample A Male 61.6
Sample B Male 66.3
Sample C Female 65.8
Sample D Female 66.8

BASAL GANGLIA - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.3
68269265 Antisense, RP_041208_01_H11, Mouse strain C57BL/6J (56 days, male) 0.3
Pallidum
Expression energy: 0.3
68269265 Antisense, RP_041208_01_H11, Mouse strain C57BL/6J (56 days, male) 0.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
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