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PLPP2
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:53.6 nTPM
HPA:53.6 nTPM
GTEx:43.4 nTPM
FANTOM5:68.3 Scaled Tags Per Million
Pig:20.8 nTPM
Mouse:9.3 nTPM
Allen mouse:0.0 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 53.6
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 44.6
2411 Female, age 72, unknown 52.3
2019 Male, age 18, unknown 51.1
1830 Male, age 51, unknown 49.2
1833 Male, age 53, unknown 49.0
1870 Female, age 42, unknown 47.5
2828 Female, age 72, unknown 45.0
2666 Male, age 74, left hemisphere 40.2
1827 Male, age 72, unknown 38.5
2219 Male, age 76, both hemispheres 37.2
2586 Male, age 75, left hemisphere 35.7
Dorsal raphe nucleus
nTPM: 39.1
2750 Male, age 76, both hemispheres 53.0
1828 Male, age 53, unknown 39.0
2016 Female, age 72, unknown 37.1
2298 Female, age 72, unknown 33.6
2047 Male, age 72, unknown 32.5
Inferior colliculus
nTPM: 37.7
1890 Male, age 53, unknown 39.6
1848 Female, age 42, unknown 37.4
2849 Male, age 72, unknown 37.0
2097 Female, age 72, unknown 36.8
Median raphe nucleus
nTPM: 34.0
2220 Male, age 76, midline 34.0
Pedunculopontine tegmental nucleus
nTPM: 40.8
2334 Male, age 80, both hemispheres 43.1
1921 Female, age 85, both hemispheres 41.1
2338 Male, age 61, both hemispheres 38.1
Periaquaductal grey, anterior
nTPM: 35.3
1947 Male, age 18, unknown 36.1
2502 Female, age 75, unknown 36.0
1795 Male, age 51, unknown 33.6
Periaquaductal grey, dorsal
nTPM: 33.1
2464 Female, age 72, unknown 38.9
1831 Male, age 72, unknown 35.2
2850 Male, age 76, both hemispheres 29.5
1840 Male, age 53, unknown 28.8
Periaquaductal grey, lateral
nTPM: 34.3
2272 Male, age 74, both hemispheres 37.9
2053 Male, age 18, unknown 35.2
2140 Male, age 76, both hemispheres 29.7
Pretectal area
nTPM: 36.9
2316 Male, age 76, right hemisphere 44.6
1815 Male, age 53, unknown 42.4
2007 Male, age 72, unknown 39.3
1817 Female, age 42, unknown 38.9
2407 Male, age 75, both hemispheres 37.5
2825 Male, age 18, unknown 35.7
2273 Male, age 74, both hemispheres 35.3
2224 Female, age 72, unknown 34.9
2667 Female, age 75, unknown 34.8
1816 Male, age 51, unknown 31.5
1944 Female, age 72, unknown 31.1
Red nucleus
nTPM: 53.6
2823 Male, age 76, right hemisphere 61.2
1904 Male, age 53, unknown 60.4
1821 Female, age 72, unknown 60.1
1865 Male, age 51, unknown 57.4
2769 Male, age 72, unknown 56.1
2227 Male, age 72, unknown 56.0
2785 Male, age 18, unknown 54.8
2503 Female, age 72, unknown 54.5
1954 Female, age 42, unknown 49.8
2588 Male, age 74, left hemisphere 48.9
2725 Female, age 75, unknown 44.4
2584 Male, age 75, left hemisphere 39.1
Substantia nigra
nTPM: 38.4
2409 Female, age 72, unknown 46.2
1889 Female, age 72, unknown 42.7
1851 Male, age 51, unknown 42.5
2590 Female, age 75, unknown 40.3
2583 Male, age 75, right hemisphere 40.2
2699 Male, age 18, unknown 37.1
1941 Male, age 53, unknown 35.0
2665 Male, age 74, both hemispheres 33.5
1916 Female, age 42, unknown 33.4
2241 Male, age 72, unknown 32.7
Superior colliculus
nTPM: 42.2
1995 Male, age 72, unknown 52.0
1895 Male, age 76, right hemisphere 51.2
1913 Female, age 42, unknown 51.0
2668 Female, age 75, unknown 44.9
2587 Male, age 74, left hemisphere 43.9
1839 Male, age 51, unknown 42.2
1796 Male, age 53, unknown 38.1
2087 Female, age 72, unknown 33.8
2261 Male, age 18, unknown 33.8
2664 Male, age 75, both hemispheres 30.7
Ventral tegmental area
nTPM: 40.7
2410 Female, age 72, unknown 47.6
2223 Female, age 72, unknown 46.1
2218 Male, age 76, both hemispheres 38.7
1915 Female, age 42, unknown 37.9
1942 Male, age 51, unknown 37.5
2021 Male, age 53, unknown 36.7

MIDBRAIN - GTEx RNA-seqi
Average nTPM 43.4
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 43.4
Samples: 139

Max nTPM: 218.2
Min nTPM: 9.2
Std nTPM: 29.4
Median nTPM: 36.1
GTEX-X4XX-0011-R2A-SM-3P623 60-69 years, male 218.2
GTEX-ZE9C-0011-R2a-SM-4WKGH 60-69 years, male 165.1
GTEX-13NYB-0011-R2a-SM-5MR3C 40-49 years, male 142.9
GTEX-1LB8K-0011-R2a-SM-EZ6MQ 50-59 years, male 114.4
GTEX-1LVA9-0011-R2a-SM-EZ6MJ 50-59 years, male 109.1
GTEX-1IKOH-0011-R2a-SM-CMKHO 60-69 years, female 107.9
GTEX-N7MT-0011-R2a-SM-2I3GI 60-69 years, female 98.7
GTEX-1HSMO-0011-R2a-SM-CL553 60-69 years, male 92.5
GTEX-1IY9M-0011-R2a-SM-D4P29 60-69 years, male 86.4
GTEX-1J8Q2-0011-R2b-SM-EAZ2X 60-69 years, male 84.8
GTEX-UTHO-0011-R2A-SM-3GIKC 60-69 years, male 84.7
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 68.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 68.3
FF:10158-103A5 76 years, female 68.3

MIDBRAIN - Pig RNA-seqi
Average nTPM 20.8
Pig sample Sample description nTPM
Midbrain
nTPM: 20.8
Samples: 4

Max nTPM: 41.2
Min nTPM: 8.8
Sample A Female 41.2
Sample B Female 21.3
Sample C Male 8.8
Sample D Male 11.9
Periaqueductal gray
nTPM: 13.4
Samples: 3

Max nTPM: 17.2
Min nTPM: 10.2
Sample B Female 17.2
Sample C Male 10.2
Sample D Male 12.8
Substantia nigra
nTPM: 19.0
Samples: 4

Max nTPM: 29.9
Min nTPM: 12.5
Sample A Female 20.4
Sample B Female 12.5
Sample C Male 13.1
Sample D Male 29.9
Superior colliculi
nTPM: 14.7
Samples: 4

Max nTPM: 19.7
Min nTPM: 9.1
Sample A Female 19.7
Sample B Female 9.1
Sample C Male 13.9
Sample D Male 16.2

MIDBRAIN - Mouse RNA-seqi
Average nTPM 9.3
Mouse sample Sample description nTPM
Midbrain
nTPM: 9.3
Samples: 4

Max nTPM: 10.7
Min nTPM: 8.2
Sample A Male 9.5
Sample B Male 8.2
Sample C Female 10.7
Sample D Female 8.8

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 0.0
68269550 Antisense, RP_041129_01_G09, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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