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PLPP2
BASAL GANGLIA - Expression summary
Protein expression
Caudatei
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:61.6 nTPM
HPA:61.6 nTPM
GTEx:32.1 nTPM
FANTOM5:32.5 Scaled Tags Per Million
Pig:14.5 nTPM
Mouse:9.0 nTPM
Allen mouse:0.0 Expression energy

CAUDATE - Antibody stainingi
Antibody HPA055540
Glial cells Low
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 61.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 35.5
2288 Male, age 75, left hemisphere 47.5
2481 Female, age 94, left hemisphere 36.0
2846 Female, age 79, unknown 35.5
1781 Male, age 74, unknown 34.9
1854 Male, age 80, left hemisphere 33.8
2289 Male, age 61, right hemisphere 33.1
2290 Female, age 72, unknown 32.8
1857 Female, age 85, left hemisphere 30.2
Claustrum
nTPM: 41.4
2292 Female, age 85, both hemispheres 55.4
1956 Male, age 74, unknown 48.0
2392 Female, age 94, both hemispheres 43.9
2198 Male, age 80, both hemispheres 40.7
2196 Female, age 79, unknown 39.5
2491 Male, age 75, both hemispheres 37.3
2284 Female, age 91, both hemispheres 37.2
2568 Male, age 61, both hemispheres 36.9
2645 Female, age 72, unknown 34.1
Globus pallidus, externus
nTPM: 56.5
1996 Male, age 80, right hemisphere 62.7
2646 Male, age 61, right hemisphere 59.9
2772 Female, age 79, unknown 56.3
2567 Female, age 72, unknown 55.3
2395 Male, age 75, both hemispheres 48.4
Globus pallidus, internus
nTPM: 61.6
2111 Female, age 85, right hemisphere 81.2
2778 Female, age 91, both hemispheres 69.6
2287 Male, age 75, right hemisphere 62.2
1818 Male, age 74, unknown 61.2
2037 Male, age 80, right hemisphere 58.6
2566 Female, age 72, unknown 58.2
2483 Female, age 94, right hemisphere 40.1
Nucleus accumbens
nTPM: 40.2
2391 Female, age 94, left hemisphere 56.8
2286 Male, age 75, left hemisphere 44.9
2732 Male, age 80, right hemisphere 43.5
2698 Female, age 72, unknown 40.5
1806 Female, age 85, left hemisphere 37.6
1783 Male, age 74, unknown 36.2
2824 Male, age 61, right hemisphere 33.3
1856 Female, age 91, right hemisphere 28.3
Nucleus basalis of Meynert
nTPM: 40.7
2569 Male, age 61, both hemispheres 49.3
2821 Male, age 75, both hemispheres 40.5
2484 Female, age 94, left hemisphere 36.9
2393 Male, age 80, right hemisphere 36.2
Nucleus of the diagonal band
nTPM: 28.0
1812 Female, age 91, both hemispheres 30.5
1979 Male, age 74, unknown 29.7
2029 Male, age 61, right hemisphere 27.5
2195 Female, age 85, both hemispheres 26.2
2775 Male, age 80, right hemisphere 26.2
Olfactory tubercle
nTPM: 28.7
1998 Female, age 91, both hemispheres 29.6
2856 Male, age 75, right hemisphere 29.3
2487 Female, age 94, left hemisphere 28.2
1846 Male, age 80, right hemisphere 27.7
Putamen
nTPM: 38.0
2482 Female, age 94, left hemisphere 44.2
1829 Male, age 74, unknown 41.3
2647 Male, age 75, left hemisphere 40.0
2489 Female, age 72, unknown 38.2
1937 Female, age 91, right hemisphere 37.6
2466 Female, age 79, unknown 34.6
1838 Male, age 80, right hemisphere 30.2
Septal nuclei
nTPM: 32.8
2394 Male, age 61, left hemisphere 48.4
2199 Male, age 80, right hemisphere 34.2
2059 Female, age 85, both hemispheres 31.6
2629 Female, age 94, right hemisphere 31.6
2009 Female, age 91, both hemispheres 29.5
2031 Female, age 72, unknown 28.1
1960 Male, age 74, unknown 26.3

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 32.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 21.9
Samples: 246

Max nTPM: 81.6
Min nTPM: 2.8
Std nTPM: 12.4
Median nTPM: 18.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 81.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 68.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 67.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 60.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 58.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 56.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 55.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 50.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 49.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 48.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 47.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 13.9
Samples: 246

Max nTPM: 115.9
Min nTPM: 1.8
Std nTPM: 11.7
Median nTPM: 10.6
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 115.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 64.9
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 61.7
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 49.9
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 49.4
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 42.1
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 41.7
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 38.9
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 38.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 38.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 36.9
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Brain - Putamen (basal ganglia)
Average nTPM: 32.1
Samples: 205

Max nTPM: 105.7
Min nTPM: 7.3
Std nTPM: 14.6
Median nTPM: 30.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 105.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 77.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 75.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 75.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 71.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 66.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 65.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 61.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 60.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 60.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 58.2
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 32.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 8.5
FF:10164-103B2 76 years, female 8.5
Globus pallidus
Scaled Tags Per Million: 32.5
FF:10161-103A8 76 years, female 40.6
FF:10175-103C4 60 years, female 24.4
Nucleus accumbens
Scaled Tags Per Million: 14.8
FF:10037-101F1 23-56 years, mixed 14.8
Putamen
Scaled Tags Per Million: 6.5
FF:10176-103C5 60 years, female 6.5

BASAL GANGLIA - Pig RNA-seqi
Average nTPM 14.5
Pig sample Sample description nTPM
Caudate
nTPM: 4.7
Samples: 4

Max nTPM: 5.5
Min nTPM: 3.8
Sample A Female 4.9
Sample B Female 5.5
Sample C Male 3.8
Sample D Male 4.4
Putamen
nTPM: 14.5
Samples: 4

Max nTPM: 27.2
Min nTPM: 7.2
Sample A Female 27.2
Sample B Female 7.2
Sample C Male 7.5
Sample D Male 16.1
Septum
nTPM: 8.0
Samples: 4

Max nTPM: 9.4
Min nTPM: 6.0
Sample A Female 9.4
Sample B Female 6.0
Sample C Male 7.2
Sample D Male 9.4
Ventral pallidum
nTPM: 12.3
Samples: 4

Max nTPM: 17.4
Min nTPM: 4.6
Sample A Female 4.6
Sample B Female 10.4
Sample C Male 16.6
Sample D Male 17.4

BASAL GANGLIA - Mouse RNA-seqi
Average nTPM 9.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 6.8
Samples: 4

Max nTPM: 8.0
Min nTPM: 5.1
Sample A Male 7.9
Sample B Male 8.0
Sample C Female 6.1
Sample D Female 5.1
Septum
nTPM: 9.0
Samples: 4

Max nTPM: 11.3
Min nTPM: 8.1
Sample A Male 8.1
Sample B Male 8.5
Sample C Female 11.3
Sample D Female 8.1
Ventral forebrain
nTPM: 4.5
Samples: 4

Max nTPM: 5.3
Min nTPM: 3.1
Sample A Male 4.5
Sample B Male 5.0
Sample C Female 5.3
Sample D Female 3.1

BASAL GANGLIA - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.0
68269550 Antisense, RP_041129_01_G09, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.0
68269550 Antisense, RP_041129_01_G09, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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