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AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:36.6 nTPM
HPA:36.6 nTPM
GTEx:45.8 nTPM
FANTOM5:58.2 Scaled Tags Per Million
Pig:11.2 nTPM
Mouse:48.3 nTPM
Allen mouse:10.3 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 36.6
Sample id Sample description nTPM
Amygdala
nTPM: 34.2
2814 Male, age 76, right hemisphere 37.3
2517 Female, age 94, left hemisphere 34.7
2695 Female, age 67, right hemisphere 33.6
1987 Female, age 91, left hemisphere 32.9
2514 Male, age 75, right hemisphere 32.8
Basal amygdala
nTPM: 36.6
2243 Female, age 91, right hemisphere 40.5
2685 Female, age 94, left hemisphere 38.9
2609 Male, age 75, right hemisphere 37.0
1955 Male, age 76, both hemispheres 35.6
2110 Male, age 80, left hemisphere 35.6
2827 Female, age 67, right hemisphere 32.2
Central amygdala
nTPM: 35.9
2826 Female, age 94, left hemisphere 38.2
1905 Male, age 76, both hemispheres 38.1
2239 Male, age 80, left hemisphere 37.0
2515 Male, age 75, right hemisphere 33.3
2701 Female, age 91, right hemisphere 32.8
Corticomedial amygdala
nTPM: 35.3
2829 Male, age 80, left hemisphere 38.4
2242 Female, age 91, right hemisphere 36.5
2535 Female, age 67, right hemisphere 35.7
2429 Female, age 94, left hemisphere 35.0
2240 Male, age 76, both hemispheres 34.1
2428 Male, age 75, right hemisphere 31.9
Lateral amygdala
nTPM: 35.9
2534 Female, age 94, left hemisphere 42.7
1883 Male, age 76, both hemispheres 37.5
2255 Female, age 91, right hemisphere 34.6
2256 Male, age 80, left hemisphere 34.1
2516 Male, age 75, right hemisphere 33.5
2830 Female, age 67, right hemisphere 32.9
Stria terminalis, bed nucleus
nTPM: 35.9
1974 Female, age 91, both hemispheres 37.8
2486 Female, age 94, both hemispheres 37.8
2201 Male, age 74, unknown 32.1

AMYGDALA - GTEx RNA-seqi
Average nTPM 45.8
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 45.8
Samples: 152

Max nTPM: 72.4
Min nTPM: 24.5
Std nTPM: 8.9
Median nTPM: 45.4
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 72.4
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 72.1
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 69.2
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 65.3
GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 62.4
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 61.5
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 61.4
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 61.0
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 60.5
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 59.4
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 59.3
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 58.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 58.2
FF:10151-102I7 76 years, female 58.2

AMYGDALA - Pig RNA-seqi
Average nTPM 11.2
Pig sample Sample description nTPM
Amygdala
nTPM: 11.2
Samples: 4

Max nTPM: 13.9
Min nTPM: 9.2
Sample A Female 13.9
Sample B Female 9.2
Sample C Male 11.5
Sample D Male 10.1

AMYGDALA - Mouse RNA-seqi
Average nTPM 48.3
Mouse sample Sample description nTPM
Amygdala
nTPM: 48.3
Samples: 4

Max nTPM: 49.8
Min nTPM: 45.6
Sample A Male 49.8
Sample B Male 48.9
Sample C Female 49.0
Sample D Female 45.6

AMYGDALA - Allen Mouse ISHi
Max Expression energy 10.3
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 10.3
68563080 Antisense, RP_050125_01_A12, Mouse strain C57BL/6J (56 days, male) 10.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.