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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:39.2 nTPM
HPA:39.2 nTPM
GTEx:48.8 nTPM
FANTOM5:67.5 Scaled Tags Per Million
Pig:14.3 nTPM
Mouse:43.8 nTPM
Allen mouse:6.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA015015
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 39.2
Sample id Sample description nTPM
Hippocampus
nTPM: 36.4
2621 Female, age 67, right hemisphere 38.4
1898 Male, age 80, left hemisphere 38.2
1855 Male, age 76, left hemisphere 37.0
2148 Female, age 91, left hemisphere 36.3
2529 Female, age 94, left hemisphere 35.5
1911 Female, age 85, right hemisphere 33.3
Dentate gyrus
nTPM: 35.4
2530 Female, age 94, left hemisphere 41.4
1927 Female, age 91, both hemispheres 36.7
2010 Male, age 76, both hemispheres 34.5
2246 Female, age 85, both hemispheres 34.3
2528 Male, age 74, both hemispheres 33.3
2531 Female, age 67, both hemispheres 32.5
Entorhinal gyrus
nTPM: 38.5
2613 Female, age 94, left hemisphere 45.4
2764 Male, age 80, right hemisphere 40.6
1787 Male, age 76, left hemisphere 40.0
1938 Female, age 85, left hemisphere 37.0
2117 Female, age 91, right hemisphere 34.0
2686 Male, age 75, right hemisphere 33.9
Hippocampus, CA1
nTPM: 37.9
2749 Male, age 80, left hemisphere 52.8
2527 Male, age 74, both hemispheres 37.6
1873 Female, age 85, both hemispheres 34.9
2082 Female, age 91, right hemisphere 33.5
2045 Male, age 76, both hemispheres 30.5
Hippocampus, CA2
nTPM: 36.8
1963 Male, age 80, left hemisphere 40.5
1892 Male, age 76, both hemispheres 40.0
2437 Female, age 94, left hemisphere 39.0
2249 Male, age 74, both hemispheres 34.3
1940 Female, age 85, left hemisphere 33.6
2113 Female, age 91, right hemisphere 33.3
Hippocampus, CA3
nTPM: 37.7
2137 Male, age 80, left hemisphere 47.2
2861 Female, age 67, both hemispheres 37.3
1867 Male, age 76, both hemispheres 37.1
2436 Male, age 74, both hemispheres 36.9
2620 Female, age 94, left hemisphere 36.5
1891 Female, age 85, both hemispheres 31.0
Parahippocampal cortex
nTPM: 36.4
2245 Female, age 91, both hemispheres 40.9
2532 Female, age 72, left hemisphere 39.3
1850 Male, age 80, both hemispheres 37.1
1933 Female, age 85, both hemispheres 36.5
1990 Female, age 91, right hemisphere 36.2
2693 Female, age 94, both hemispheres 35.9
2250 Female, age 67, right hemisphere 35.7
2622 Female, age 67, right hemisphere 35.0
2692 Male, age 74, both hemispheres 34.2
2018 Male, age 76, both hemispheres 33.2
Perirhinal gyrus
nTPM: 39.2
1847 Female, age 91, left hemisphere 42.1
1794 Male, age 80, right hemisphere 41.8
2521 Female, age 94, right hemisphere 41.1
1841 Female, age 85, right hemisphere 37.0
2848 Male, age 76, right hemisphere 33.8
Subiculum
nTPM: 35.9
2438 Female, age 94, left hemisphere 39.4
1901 Male, age 80, both hemispheres 38.8
1977 Female, age 85, both hemispheres 37.4
2619 Male, age 74, both hemispheres 36.8
2042 Male, age 76, both hemispheres 32.8
2729 Female, age 91, right hemisphere 30.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 48.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 48.8
Samples: 197

Max nTPM: 114.7
Min nTPM: 20.9
Std nTPM: 13.1
Median nTPM: 47.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 114.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 93.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 83.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 77.0
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 77.0
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 74.1
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 71.8
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 71.4
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 71.2
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 70.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 70.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 67.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 67.5
FF:10169-103B7 60 years, female 77.4
FF:10153-102I9 76 years, female 57.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 14.2
Samples: 4

Max nTPM: 18.0
Min nTPM: 10.7
Sample A Female 18.0
Sample B Female 13.8
Sample C Male 14.1
Sample D Male 10.7
Entorhinal cortex
nTPM: 13.1
Samples: 4

Max nTPM: 14.5
Min nTPM: 11.2
Sample A Female 14.5
Sample B Female 12.9
Sample C Male 13.9
Sample D Male 11.2
Subiculum
nTPM: 13.5
Samples: 4

Max nTPM: 16.7
Min nTPM: 11.7
Sample A Female 16.7
Sample B Female 11.7
Sample C Male 13.7
Sample D Male 11.8
Ventral hippocampus
nTPM: 14.3
Samples: 4

Max nTPM: 19.1
Min nTPM: 9.5
Sample A Female 13.7
Sample B Female 9.5
Sample C Male 19.1
Sample D Male 14.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 43.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 43.9
Samples: 4

Max nTPM: 47.1
Min nTPM: 40.2
Sample A Male 40.2
Sample B Male 44.6
Sample C Female 47.1
Sample D Female 43.5
Hippocampal formation
nTPM: 38.7
Samples: 4

Max nTPM: 41.2
Min nTPM: 36.3
Sample A Male 39.2
Sample B Male 36.3
Sample C Female 37.9
Sample D Female 41.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.4
68563080 Antisense, RP_050125_01_A12, Mouse strain C57BL/6J (56 days, male) 6.4

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