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AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:37.6 nTPM
HPA:37.6 nTPM
GTEx:28.7 nTPM
FANTOM5:29.2 Scaled Tags Per Million
Pig:1.3 nTPM
Mouse:7.6 nTPM
Allen mouse:0.0 Expression energy

AMYGDALA - Annotated protein expression
Pending normal tissue analysis

AMYGDALA - HPA Brain RNA-seq
Max nTPM 37.6
Sample id Sample description nTPM
Amygdala
nTPM: 37.6
1987 Female, age 91, left hemisphere 43.3
2695 Female, age 67, right hemisphere 38.3
2514 Male, age 75, right hemisphere 36.1
2814 Male, age 76, right hemisphere 35.7
2517 Female, age 94, left hemisphere 34.8
Basal amygdala
nTPM: 34.7
2110 Male, age 80, left hemisphere 36.1
2243 Female, age 91, right hemisphere 36.1
1955 Male, age 76, both hemispheres 35.5
2609 Male, age 75, right hemisphere 35.4
2685 Female, age 94, left hemisphere 33.3
2827 Female, age 67, right hemisphere 31.9
Central amygdala
nTPM: 37.4
2515 Male, age 75, right hemisphere 44.2
2826 Female, age 94, left hemisphere 36.8
2701 Female, age 91, right hemisphere 36.2
2239 Male, age 80, left hemisphere 35.5
1905 Male, age 76, both hemispheres 34.5
Corticomedial amygdala
nTPM: 36.0
2242 Female, age 91, right hemisphere 40.8
2240 Male, age 76, both hemispheres 37.2
2829 Male, age 80, left hemisphere 36.6
2428 Male, age 75, right hemisphere 35.0
2429 Female, age 94, left hemisphere 34.0
2535 Female, age 67, right hemisphere 32.5
Lateral amygdala
nTPM: 35.6
2256 Male, age 80, left hemisphere 40.4
2255 Female, age 91, right hemisphere 35.7
2830 Female, age 67, right hemisphere 35.5
2516 Male, age 75, right hemisphere 34.6
1883 Male, age 76, both hemispheres 33.8
2534 Female, age 94, left hemisphere 33.6
Stria terminalis, bed nucleus
nTPM: 33.0
2201 Male, age 74, unknown 33.7
1974 Female, age 91, both hemispheres 33.1
2486 Female, age 94, both hemispheres 32.1

AMYGDALA - GTEx RNA-seqi
Average nTPM 28.7
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 28.7
Samples: 152

Max nTPM: 160.6
Min nTPM: 6.9
Std nTPM: 18.7
Median nTPM: 24.1
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 160.6
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 112.7
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 80.3
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 78.2
GTEX-1JN6P-0011-R4a-SM-EZ6MS 60-69 years, male 72.9
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 72.6
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 66.7
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 65.6
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 59.6
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 56.5
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 50.6
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 29.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 29.2
FF:10151-102I7 76 years, female 29.2

AMYGDALA - Pig RNA-seqi
Average nTPM 1.3
Pig sample Sample description nTPM
Amygdala
nTPM: 1.4
Samples: 4

Max nTPM: 1.8
Min nTPM: 1.1
Sample A Female 1.8
Sample B Female 1.1
Sample C Male 1.4
Sample D Male 1.1

AMYGDALA - Mouse RNA-seqi
Average nTPM 7.6
Mouse sample Sample description nTPM
Amygdala
nTPM: 7.6
Samples: 4

Max nTPM: 9.5
Min nTPM: 5.1
Sample A Male 8.4
Sample B Male 7.3
Sample C Female 5.1
Sample D Female 9.5

AMYGDALA - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 0.0
68076548 Antisense, RP_040923_02_F09, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.