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GEMIN7
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:17.1 nTPM
HPA:17.1 nTPM
GTEx:13.0 nTPM
FANTOM5:8.8 Scaled Tags Per Million
Pig:3.3 nTPM
Mouse:50.3 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.1
Sample id Sample description nTPM
Hippocampus
nTPM: 16.3
2148 Female, age 91, left hemisphere 17.3
1898 Male, age 80, left hemisphere 17.1
2529 Female, age 94, left hemisphere 16.3
1911 Female, age 85, right hemisphere 16.0
1855 Male, age 76, left hemisphere 15.7
2621 Female, age 67, right hemisphere 15.1
Dentate gyrus
nTPM: 16.7
2528 Male, age 74, both hemispheres 18.0
2010 Male, age 76, both hemispheres 17.5
1927 Female, age 91, both hemispheres 16.8
2530 Female, age 94, left hemisphere 16.1
2531 Female, age 67, both hemispheres 16.0
2246 Female, age 85, both hemispheres 15.7
Entorhinal gyrus
nTPM: 16.4
2764 Male, age 80, right hemisphere 18.1
2613 Female, age 94, left hemisphere 16.7
1787 Male, age 76, left hemisphere 16.4
2117 Female, age 91, right hemisphere 15.9
2686 Male, age 75, right hemisphere 15.6
1938 Female, age 85, left hemisphere 15.4
Hippocampus, CA1
nTPM: 16.7
2749 Male, age 80, left hemisphere 17.5
2527 Male, age 74, both hemispheres 17.2
2045 Male, age 76, both hemispheres 16.7
2082 Female, age 91, right hemisphere 16.4
1873 Female, age 85, both hemispheres 15.9
Hippocampus, CA2
nTPM: 17.1
2437 Female, age 94, left hemisphere 17.8
1963 Male, age 80, left hemisphere 17.4
1892 Male, age 76, both hemispheres 17.3
2113 Female, age 91, right hemisphere 17.0
2249 Male, age 74, both hemispheres 16.8
1940 Female, age 85, left hemisphere 16.6
Hippocampus, CA3
nTPM: 16.2
1891 Female, age 85, both hemispheres 16.6
2620 Female, age 94, left hemisphere 16.6
1867 Male, age 76, both hemispheres 16.5
2436 Male, age 74, both hemispheres 16.5
2137 Male, age 80, left hemisphere 15.6
2861 Female, age 67, both hemispheres 15.6
Parahippocampal cortex
nTPM: 16.2
1990 Female, age 91, right hemisphere 18.0
2018 Male, age 76, both hemispheres 16.5
1850 Male, age 80, both hemispheres 16.4
1933 Female, age 85, both hemispheres 16.4
2250 Female, age 67, right hemisphere 16.3
2532 Female, age 72, left hemisphere 15.9
2693 Female, age 94, both hemispheres 15.9
2245 Female, age 91, both hemispheres 15.8
2622 Female, age 67, right hemisphere 15.5
2692 Male, age 74, both hemispheres 15.5
Perirhinal gyrus
nTPM: 16.7
1847 Female, age 91, left hemisphere 17.7
1794 Male, age 80, right hemisphere 17.1
1841 Female, age 85, right hemisphere 16.9
2521 Female, age 94, right hemisphere 16.4
2848 Male, age 76, right hemisphere 15.3
Subiculum
nTPM: 16.3
1977 Female, age 85, both hemispheres 17.2
2729 Female, age 91, right hemisphere 16.8
2619 Male, age 74, both hemispheres 16.6
1901 Male, age 80, both hemispheres 16.1
2042 Male, age 76, both hemispheres 15.6
2438 Female, age 94, left hemisphere 15.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.0
Samples: 197

Max nTPM: 27.9
Min nTPM: 4.1
Std nTPM: 3.9
Median nTPM: 12.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 27.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 25.7
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 22.0
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 21.9
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 21.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 21.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 20.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 20.6
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 20.5
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 20.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 20.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 8.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 8.8
FF:10169-103B7 60 years, female 9.4
FF:10153-102I9 76 years, female 8.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 3.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 2.8
Samples: 4

Max nTPM: 3.4
Min nTPM: 2.4
Sample A Female 3.4
Sample B Female 2.8
Sample C Male 2.6
Sample D Male 2.4
Entorhinal cortex
nTPM: 3.3
Samples: 4

Max nTPM: 3.6
Min nTPM: 2.8
Sample A Female 3.5
Sample B Female 3.6
Sample C Male 3.2
Sample D Male 2.8
Subiculum
nTPM: 3.0
Samples: 4

Max nTPM: 3.4
Min nTPM: 2.6
Sample A Female 3.4
Sample B Female 3.3
Sample C Male 2.7
Sample D Male 2.6
Ventral hippocampus
nTPM: 3.0
Samples: 4

Max nTPM: 3.7
Min nTPM: 2.6
Sample A Female 2.9
Sample B Female 2.8
Sample C Male 3.7
Sample D Male 2.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 50.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 50.3
Samples: 4

Max nTPM: 53.2
Min nTPM: 47.0
Sample A Male 48.6
Sample B Male 52.4
Sample C Female 53.2
Sample D Female 47.0
Hippocampal formation
nTPM: 47.6
Samples: 4

Max nTPM: 54.9
Min nTPM: 40.3
Sample A Male 54.9
Sample B Male 40.3
Sample C Female 50.6
Sample D Female 44.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
70545925 Antisense, RP_050623_03_C01, Mouse strain C57BL/6J (56 days, male) 0.5

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