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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:27.6 nTPM
HPA:27.6 nTPM
GTEx:21.7 nTPM
FANTOM5:28.7 Scaled Tags Per Million
Pig:16.3 nTPM
Mouse:34.1 nTPM
Allen mouse:4.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA069313Antibody CAB032961
Glial cells LowLow
Neuronal cells LowNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 27.6
Sample id Sample description nTPM
Hippocampus
nTPM: 25.4
2621 Female, age 67, right hemisphere 27.0
1855 Male, age 76, left hemisphere 26.9
1898 Male, age 80, left hemisphere 26.4
2148 Female, age 91, left hemisphere 26.0
2529 Female, age 94, left hemisphere 25.0
1911 Female, age 85, right hemisphere 21.1
Dentate gyrus
nTPM: 27.6
2530 Female, age 94, left hemisphere 33.8
2531 Female, age 67, both hemispheres 32.0
1927 Female, age 91, both hemispheres 27.3
2246 Female, age 85, both hemispheres 24.9
2010 Male, age 76, both hemispheres 24.3
2528 Male, age 74, both hemispheres 23.3
Entorhinal gyrus
nTPM: 25.6
2613 Female, age 94, left hemisphere 31.2
2764 Male, age 80, right hemisphere 26.5
1787 Male, age 76, left hemisphere 25.2
2686 Male, age 75, right hemisphere 24.1
1938 Female, age 85, left hemisphere 23.7
2117 Female, age 91, right hemisphere 22.6
Hippocampus, CA1
nTPM: 24.3
2749 Male, age 80, left hemisphere 29.5
1873 Female, age 85, both hemispheres 25.8
2527 Male, age 74, both hemispheres 25.1
2045 Male, age 76, both hemispheres 21.9
2082 Female, age 91, right hemisphere 19.3
Hippocampus, CA2
nTPM: 24.4
1963 Male, age 80, left hemisphere 27.4
2437 Female, age 94, left hemisphere 26.9
1892 Male, age 76, both hemispheres 25.3
2113 Female, age 91, right hemisphere 22.6
2249 Male, age 74, both hemispheres 22.6
1940 Female, age 85, left hemisphere 21.3
Hippocampus, CA3
nTPM: 26.9
2861 Female, age 67, both hemispheres 34.8
2620 Female, age 94, left hemisphere 31.6
2137 Male, age 80, left hemisphere 26.8
2436 Male, age 74, both hemispheres 25.0
1867 Male, age 76, both hemispheres 22.3
1891 Female, age 85, both hemispheres 20.8
Parahippocampal cortex
nTPM: 24.4
2245 Female, age 91, both hemispheres 28.6
2622 Female, age 67, right hemisphere 25.7
2250 Female, age 67, right hemisphere 24.9
2532 Female, age 72, left hemisphere 24.6
1850 Male, age 80, both hemispheres 24.1
2693 Female, age 94, both hemispheres 24.1
2692 Male, age 74, both hemispheres 23.8
1933 Female, age 85, both hemispheres 23.6
1990 Female, age 91, right hemisphere 23.5
2018 Male, age 76, both hemispheres 20.7
Perirhinal gyrus
nTPM: 25.6
2521 Female, age 94, right hemisphere 30.9
1794 Male, age 80, right hemisphere 26.1
1847 Female, age 91, left hemisphere 24.6
1841 Female, age 85, right hemisphere 23.5
2848 Male, age 76, right hemisphere 23.0
Subiculum
nTPM: 21.7
1977 Female, age 85, both hemispheres 23.0
2438 Female, age 94, left hemisphere 22.8
1901 Male, age 80, both hemispheres 22.3
2729 Female, age 91, right hemisphere 21.4
2619 Male, age 74, both hemispheres 21.2
2042 Male, age 76, both hemispheres 19.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.7
Samples: 197

Max nTPM: 47.0
Min nTPM: 7.4
Std nTPM: 8.6
Median nTPM: 20.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 47.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 46.1
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 44.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 44.3
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 43.7
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 39.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 39.1
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 38.8
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 38.8
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 37.0
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 35.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 28.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 28.7
FF:10169-103B7 60 years, female 30.3
FF:10153-102I9 76 years, female 27.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 15.8
Samples: 4

Max nTPM: 18.2
Min nTPM: 13.1
Sample A Female 18.2
Sample B Female 17.6
Sample C Male 14.1
Sample D Male 13.1
Entorhinal cortex
nTPM: 15.7
Samples: 4

Max nTPM: 18.1
Min nTPM: 13.9
Sample A Female 18.1
Sample B Female 14.2
Sample C Male 16.5
Sample D Male 13.9
Subiculum
nTPM: 15.7
Samples: 4

Max nTPM: 20.2
Min nTPM: 13.3
Sample A Female 20.2
Sample B Female 14.0
Sample C Male 15.1
Sample D Male 13.3
Ventral hippocampus
nTPM: 16.3
Samples: 4

Max nTPM: 21.3
Min nTPM: 11.7
Sample A Female 13.9
Sample B Female 11.7
Sample C Male 21.3
Sample D Male 18.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 34.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 34.1
Samples: 4

Max nTPM: 37.1
Min nTPM: 32.6
Sample A Male 32.8
Sample B Male 33.8
Sample C Female 32.6
Sample D Female 37.1
Hippocampal formation
nTPM: 33.8
Samples: 4

Max nTPM: 37.1
Min nTPM: 30.7
Sample A Male 30.7
Sample B Male 37.1
Sample C Female 36.2
Sample D Female 31.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.5
686190 Antisense, RP_040914_02_H10, Mouse strain C57BL/6J (56 days, male) 4.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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