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TMCO1
AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:46.4 nTPM
HPA:46.4 nTPM
GTEx:24.9 nTPM
FANTOM5:81.3 Scaled Tags Per Million
Pig:44.1 nTPM
Mouse:62.6 nTPM
Allen mouse:0.3 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 46.4
Sample id Sample description nTPM
Amygdala
nTPM: 46.4
1987 Female, age 91, left hemisphere 50.6
2514 Male, age 75, right hemisphere 49.3
2814 Male, age 76, right hemisphere 45.8
2517 Female, age 94, left hemisphere 43.6
2695 Female, age 67, right hemisphere 42.5
Basal amygdala
nTPM: 42.2
1955 Male, age 76, both hemispheres 45.4
2110 Male, age 80, left hemisphere 44.8
2609 Male, age 75, right hemisphere 44.8
2243 Female, age 91, right hemisphere 43.5
2685 Female, age 94, left hemisphere 40.2
2827 Female, age 67, right hemisphere 34.7
Central amygdala
nTPM: 43.8
1905 Male, age 76, both hemispheres 49.2
2239 Male, age 80, left hemisphere 45.5
2515 Male, age 75, right hemisphere 43.7
2701 Female, age 91, right hemisphere 41.6
2826 Female, age 94, left hemisphere 39.1
Corticomedial amygdala
nTPM: 45.4
2428 Male, age 75, right hemisphere 48.0
2242 Female, age 91, right hemisphere 47.4
2829 Male, age 80, left hemisphere 47.1
2240 Male, age 76, both hemispheres 45.6
2429 Female, age 94, left hemisphere 44.3
2535 Female, age 67, right hemisphere 39.9
Lateral amygdala
nTPM: 41.9
2516 Male, age 75, right hemisphere 47.2
1883 Male, age 76, both hemispheres 44.7
2256 Male, age 80, left hemisphere 43.1
2255 Female, age 91, right hemisphere 42.3
2534 Female, age 94, left hemisphere 39.8
2830 Female, age 67, right hemisphere 34.6
Stria terminalis, bed nucleus
nTPM: 43.6
2201 Male, age 74, unknown 45.1
1974 Female, age 91, both hemispheres 43.3
2486 Female, age 94, both hemispheres 42.5

AMYGDALA - GTEx RNA-seqi
Average nTPM 24.9
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 24.9
Samples: 152

Max nTPM: 44.2
Min nTPM: 6.4
Std nTPM: 6.9
Median nTPM: 24.8
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 44.2
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 42.9
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 40.5
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 39.8
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 39.7
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 39.1
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 38.0
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 38.0
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 37.8
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 37.4
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 36.6
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 81.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 81.3
FF:10151-102I7 76 years, female 81.3

AMYGDALA - Pig RNA-seqi
Average nTPM 44.1
Pig sample Sample description nTPM
Amygdala
nTPM: 44.1
Samples: 4

Max nTPM: 47.2
Min nTPM: 41.5
Sample A Female 41.5
Sample B Female 47.2
Sample C Male 42.5
Sample D Male 45.0

AMYGDALA - Mouse RNA-seqi
Average nTPM 62.6
Mouse sample Sample description nTPM
Amygdala
nTPM: 62.6
Samples: 4

Max nTPM: 67.1
Min nTPM: 58.5
Sample A Male 58.5
Sample B Male 58.7
Sample C Female 66.2
Sample D Female 67.1

AMYGDALA - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 0.3
386233 Antisense, RP_040804_01_C05, Mouse strain C57BL/6J (56 days, male) 0.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.