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MGST3
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:228.8 nTPM
HPA:228.8 nTPM
GTEx:258.6 nTPM
FANTOM5:211.2 Scaled Tags Per Million
Pig:173.9 nTPM
Mouse:115.5 nTPM
Allen mouse:4.1 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 228.8
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 210.6
2019 Male, age 18, unknown 228.3
2411 Female, age 72, unknown 220.7
1827 Male, age 72, unknown 220.0
1870 Female, age 42, unknown 212.5
2219 Male, age 76, both hemispheres 211.8
2828 Female, age 72, unknown 210.8
1830 Male, age 51, unknown 205.2
1833 Male, age 53, unknown 203.0
2666 Male, age 74, left hemisphere 200.8
2586 Male, age 75, left hemisphere 192.7
Dorsal raphe nucleus
nTPM: 219.1
2298 Female, age 72, unknown 236.1
2750 Male, age 76, both hemispheres 223.0
1828 Male, age 53, unknown 221.2
2047 Male, age 72, unknown 217.6
2016 Female, age 72, unknown 197.5
Inferior colliculus
nTPM: 207.1
2097 Female, age 72, unknown 216.0
1890 Male, age 53, unknown 214.3
1848 Female, age 42, unknown 205.6
2849 Male, age 72, unknown 192.6
Median raphe nucleus
nTPM: 219.7
2220 Male, age 76, midline 219.7
Pedunculopontine tegmental nucleus
nTPM: 224.6
2334 Male, age 80, both hemispheres 226.6
2338 Male, age 61, both hemispheres 225.4
1921 Female, age 85, both hemispheres 221.8
Periaquaductal grey, anterior
nTPM: 207.9
1795 Male, age 51, unknown 210.9
1947 Male, age 18, unknown 206.5
2502 Female, age 75, unknown 206.2
Periaquaductal grey, dorsal
nTPM: 203.0
2464 Female, age 72, unknown 205.4
2850 Male, age 76, both hemispheres 205.1
1831 Male, age 72, unknown 202.5
1840 Male, age 53, unknown 199.1
Periaquaductal grey, lateral
nTPM: 206.2
2272 Male, age 74, both hemispheres 215.3
2053 Male, age 18, unknown 210.2
2140 Male, age 76, both hemispheres 193.3
Pretectal area
nTPM: 222.5
1944 Female, age 72, unknown 240.1
1816 Male, age 51, unknown 238.8
2007 Male, age 72, unknown 236.9
1817 Female, age 42, unknown 234.0
1815 Male, age 53, unknown 226.9
2273 Male, age 74, both hemispheres 220.7
2667 Female, age 75, unknown 220.3
2224 Female, age 72, unknown 217.2
2407 Male, age 75, both hemispheres 207.5
2825 Male, age 18, unknown 203.2
2316 Male, age 76, right hemisphere 202.2
Red nucleus
nTPM: 219.9
1821 Female, age 72, unknown 255.3
2725 Female, age 75, unknown 229.0
1954 Female, age 42, unknown 218.4
2785 Male, age 18, unknown 218.2
1865 Male, age 51, unknown 217.7
2823 Male, age 76, right hemisphere 217.7
2503 Female, age 72, unknown 217.1
2769 Male, age 72, unknown 217.0
1904 Male, age 53, unknown 216.0
2227 Male, age 72, unknown 214.6
2588 Male, age 74, left hemisphere 209.6
2584 Male, age 75, left hemisphere 207.7
Substantia nigra
nTPM: 228.8
1941 Male, age 53, unknown 250.2
1916 Female, age 42, unknown 243.7
1889 Female, age 72, unknown 240.9
1851 Male, age 51, unknown 239.3
2241 Male, age 72, unknown 237.4
2590 Female, age 75, unknown 224.6
2699 Male, age 18, unknown 217.4
2409 Female, age 72, unknown 216.0
2665 Male, age 74, both hemispheres 212.3
2583 Male, age 75, right hemisphere 206.0
Superior colliculus
nTPM: 209.8
2087 Female, age 72, unknown 220.8
2587 Male, age 74, left hemisphere 220.4
1895 Male, age 76, right hemisphere 217.8
2261 Male, age 18, unknown 216.7
1913 Female, age 42, unknown 209.1
2668 Female, age 75, unknown 206.2
1796 Male, age 53, unknown 204.6
1995 Male, age 72, unknown 203.8
1839 Male, age 51, unknown 200.7
2664 Male, age 75, both hemispheres 198.2
Ventral tegmental area
nTPM: 220.5
2218 Male, age 76, both hemispheres 230.5
1915 Female, age 42, unknown 228.2
2410 Female, age 72, unknown 224.6
2223 Female, age 72, unknown 222.9
1942 Male, age 51, unknown 209.4
2021 Male, age 53, unknown 207.6

MIDBRAIN - GTEx RNA-seqi
Average nTPM 258.6
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 258.6
Samples: 139

Max nTPM: 574.6
Min nTPM: 81.4
Std nTPM: 75.6
Median nTPM: 251.0
GTEX-1LVA9-0011-R2a-SM-EZ6MJ 50-59 years, male 574.6
GTEX-Z93S-0011-R2a-SM-4RGNG 50-59 years, male 504.3
GTEX-1IKOH-0011-R2a-SM-CMKHO 60-69 years, female 447.9
GTEX-1MA7X-0011-R2b-SM-EZ6MT 60-69 years, male 430.6
GTEX-1313W-0011-R2a-SM-5EGLF 50-59 years, female 426.9
GTEX-1IY9M-0011-R2a-SM-D4P29 60-69 years, male 415.5
GTEX-1E1VI-0011-R2a-SM-9QEGS 50-59 years, male 407.5
GTEX-15ER7-0011-R2a-SM-6M46O 20-29 years, female 392.3
GTEX-1B933-0011-R2b-SM-7IGNM 50-59 years, female 386.2
GTEX-1EMGI-0011-R2b-SM-9OSVS 60-69 years, male 366.8
GTEX-ZE9C-0011-R2a-SM-4WKGH 60-69 years, male 364.6
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 211.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 211.2
FF:10158-103A5 76 years, female 211.2

MIDBRAIN - Pig RNA-seqi
Average nTPM 173.9
Pig sample Sample description nTPM
Midbrain
nTPM: 154.4
Samples: 4

Max nTPM: 201.2
Min nTPM: 108.4
Sample A Female 190.4
Sample B Female 117.6
Sample C Male 201.2
Sample D Male 108.4
Periaqueductal gray
nTPM: 94.6
Samples: 3

Max nTPM: 101.2
Min nTPM: 83.4
Sample B Female 101.2
Sample C Male 99.2
Sample D Male 83.4
Substantia nigra
nTPM: 120.6
Samples: 4

Max nTPM: 202.2
Min nTPM: 80.3
Sample A Female 202.2
Sample B Female 82.2
Sample C Male 117.7
Sample D Male 80.3
Superior colliculi
nTPM: 173.9
Samples: 4

Max nTPM: 251.2
Min nTPM: 102.8
Sample A Female 207.9
Sample B Female 102.8
Sample C Male 251.2
Sample D Male 133.8

MIDBRAIN - Mouse RNA-seqi
Average nTPM 115.5
Mouse sample Sample description nTPM
Midbrain
nTPM: 115.5
Samples: 4

Max nTPM: 126.0
Min nTPM: 104.4
Sample A Male 126.0
Sample B Male 114.8
Sample C Female 104.4
Sample D Female 116.7

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 4.1
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 4.1
68441640 Antisense, RP_041214_02_G04, Mouse strain C57BL/6J (56 days, male) 4.3
71015350 Antisense, RP_050725_02_G06, Mouse strain C57BL/6J (56 days, male) 3.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.