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SELENBP1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:47.1 nTPM
HPA:47.1 nTPM
GTEx:32.8 nTPM
FANTOM5:84.7 Scaled Tags Per Million
Pig:77.4 nTPM
Mouse:16.6 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA005741Antibody HPA011731Antibody CAB008366
Glial cells Not detectedNot detectedNot detected
Neuronal cells MediumNot detectedNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 47.1
Sample id Sample description nTPM
Hippocampus
nTPM: 47.1
2148 Female, age 91, left hemisphere 49.3
1898 Male, age 80, left hemisphere 48.7
1911 Female, age 85, right hemisphere 47.6
2529 Female, age 94, left hemisphere 47.4
1855 Male, age 76, left hemisphere 45.0
2621 Female, age 67, right hemisphere 44.8
Dentate gyrus
nTPM: 44.4
2528 Male, age 74, both hemispheres 46.8
2246 Female, age 85, both hemispheres 45.8
2010 Male, age 76, both hemispheres 44.4
2530 Female, age 94, left hemisphere 44.3
1927 Female, age 91, both hemispheres 44.0
2531 Female, age 67, both hemispheres 41.3
Entorhinal gyrus
nTPM: 45.1
2117 Female, age 91, right hemisphere 51.4
1938 Female, age 85, left hemisphere 46.7
1787 Male, age 76, left hemisphere 44.9
2764 Male, age 80, right hemisphere 43.6
2686 Male, age 75, right hemisphere 42.8
2613 Female, age 94, left hemisphere 40.9
Hippocampus, CA1
nTPM: 45.0
2527 Male, age 74, both hemispheres 47.6
1873 Female, age 85, both hemispheres 46.8
2082 Female, age 91, right hemisphere 46.3
2749 Male, age 80, left hemisphere 43.3
2045 Male, age 76, both hemispheres 40.9
Hippocampus, CA2
nTPM: 45.6
2249 Male, age 74, both hemispheres 48.9
1940 Female, age 85, left hemisphere 48.0
2113 Female, age 91, right hemisphere 47.7
1963 Male, age 80, left hemisphere 45.0
2437 Female, age 94, left hemisphere 44.0
1892 Male, age 76, both hemispheres 40.4
Hippocampus, CA3
nTPM: 44.2
2436 Male, age 74, both hemispheres 47.3
1891 Female, age 85, both hemispheres 46.2
2620 Female, age 94, left hemisphere 43.9
1867 Male, age 76, both hemispheres 43.3
2137 Male, age 80, left hemisphere 42.6
2861 Female, age 67, both hemispheres 41.8
Parahippocampal cortex
nTPM: 45.0
2622 Female, age 67, right hemisphere 46.6
1933 Female, age 85, both hemispheres 46.4
2250 Female, age 67, right hemisphere 46.4
1990 Female, age 91, right hemisphere 45.9
2692 Male, age 74, both hemispheres 45.2
2018 Male, age 76, both hemispheres 44.6
1850 Male, age 80, both hemispheres 44.1
2245 Female, age 91, both hemispheres 44.0
2693 Female, age 94, both hemispheres 43.6
2532 Female, age 72, left hemisphere 42.9
Perirhinal gyrus
nTPM: 44.2
1794 Male, age 80, right hemisphere 46.4
1847 Female, age 91, left hemisphere 45.8
1841 Female, age 85, right hemisphere 44.7
2521 Female, age 94, right hemisphere 42.7
2848 Male, age 76, right hemisphere 41.1
Subiculum
nTPM: 45.5
2729 Female, age 91, right hemisphere 51.1
2619 Male, age 74, both hemispheres 48.2
2042 Male, age 76, both hemispheres 45.1
1977 Female, age 85, both hemispheres 44.0
1901 Male, age 80, both hemispheres 43.1
2438 Female, age 94, left hemisphere 41.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 32.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 32.8
Samples: 197

Max nTPM: 79.0
Min nTPM: 6.9
Std nTPM: 13.1
Median nTPM: 31.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 79.0
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 74.7
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 65.8
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 64.6
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 64.4
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 63.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 61.7
GTEX-1EKGG-0011-R1b-SM-9QEI1 60-69 years, male 60.6
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 58.6
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 56.8
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 56.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 84.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 84.7
FF:10153-102I9 76 years, female 107.7
FF:10169-103B7 60 years, female 61.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 77.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 77.5
Samples: 4

Max nTPM: 110.8
Min nTPM: 45.2
Sample A Female 110.8
Sample B Female 52.3
Sample C Male 101.5
Sample D Male 45.2
Entorhinal cortex
nTPM: 53.9
Samples: 4

Max nTPM: 59.0
Min nTPM: 43.8
Sample A Female 59.0
Sample B Female 55.8
Sample C Male 56.9
Sample D Male 43.8
Subiculum
nTPM: 66.7
Samples: 4

Max nTPM: 89.4
Min nTPM: 54.1
Sample A Female 89.4
Sample B Female 64.3
Sample C Male 59.1
Sample D Male 54.1
Ventral hippocampus
nTPM: 69.3
Samples: 4

Max nTPM: 89.0
Min nTPM: 52.6
Sample A Female 72.3
Sample B Female 52.6
Sample C Male 89.0
Sample D Male 63.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 16.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.7
Samples: 4

Max nTPM: 19.4
Min nTPM: 14.9
Sample A Male 15.7
Sample B Male 14.9
Sample C Female 16.6
Sample D Female 19.4
Hippocampal formation
nTPM: 14.4
Samples: 4

Max nTPM: 15.6
Min nTPM: 12.5
Sample A Male 15.6
Sample B Male 12.5
Sample C Female 13.9
Sample D Female 15.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
69261401 Antisense, RP_050113_02_H11, Mouse strain C57BL/6J (56 days, male) 0.9
71764287 Antisense, RP_050921_03_E02, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.