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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:109.0 nTPM
HPA:109.0 nTPM
GTEx:52.7 nTPM
FANTOM5:243.8 Scaled Tags Per Million
Pig:31.2 nTPM
Mouse:11.8 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030273
Glial cells Medium
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 109.0
Sample id Sample description nTPM
Hippocampus
nTPM: 108.2
2148 Female, age 91, left hemisphere 122.5
1855 Male, age 76, left hemisphere 119.9
2529 Female, age 94, left hemisphere 117.4
1898 Male, age 80, left hemisphere 110.3
1911 Female, age 85, right hemisphere 94.1
2621 Female, age 67, right hemisphere 85.3
Dentate gyrus
nTPM: 100.9
2528 Male, age 74, both hemispheres 120.8
2010 Male, age 76, both hemispheres 116.6
2530 Female, age 94, left hemisphere 105.8
2246 Female, age 85, both hemispheres 104.3
2531 Female, age 67, both hemispheres 79.9
1927 Female, age 91, both hemispheres 78.2
Entorhinal gyrus
nTPM: 98.5
2117 Female, age 91, right hemisphere 136.9
1787 Male, age 76, left hemisphere 106.4
2686 Male, age 75, right hemisphere 105.5
2764 Male, age 80, right hemisphere 85.5
1938 Female, age 85, left hemisphere 81.7
2613 Female, age 94, left hemisphere 74.8
Hippocampus, CA1
nTPM: 93.7
2527 Male, age 74, both hemispheres 106.4
2082 Female, age 91, right hemisphere 102.2
1873 Female, age 85, both hemispheres 95.6
2045 Male, age 76, both hemispheres 93.7
2749 Male, age 80, left hemisphere 70.7
Hippocampus, CA2
nTPM: 97.2
1940 Female, age 85, left hemisphere 112.8
2249 Male, age 74, both hemispheres 107.1
2113 Female, age 91, right hemisphere 103.1
1963 Male, age 80, left hemisphere 98.4
2437 Female, age 94, left hemisphere 90.0
1892 Male, age 76, both hemispheres 71.9
Hippocampus, CA3
nTPM: 94.7
2436 Male, age 74, both hemispheres 111.6
2861 Female, age 67, both hemispheres 104.3
1891 Female, age 85, both hemispheres 104.2
2620 Female, age 94, left hemisphere 86.6
1867 Male, age 76, both hemispheres 82.2
2137 Male, age 80, left hemisphere 79.2
Parahippocampal cortex
nTPM: 88.6
2692 Male, age 74, both hemispheres 119.0
2018 Male, age 76, both hemispheres 104.7
2622 Female, age 67, right hemisphere 91.3
2250 Female, age 67, right hemisphere 87.8
1990 Female, age 91, right hemisphere 85.2
2245 Female, age 91, both hemispheres 82.4
1850 Male, age 80, both hemispheres 80.9
1933 Female, age 85, both hemispheres 80.5
2532 Female, age 72, left hemisphere 78.4
2693 Female, age 94, both hemispheres 75.6
Perirhinal gyrus
nTPM: 74.9
2521 Female, age 94, right hemisphere 79.7
2848 Male, age 76, right hemisphere 77.1
1794 Male, age 80, right hemisphere 74.5
1847 Female, age 91, left hemisphere 72.2
1841 Female, age 85, right hemisphere 70.9
Subiculum
nTPM: 109.0
2729 Female, age 91, right hemisphere 135.6
2042 Male, age 76, both hemispheres 122.8
2619 Male, age 74, both hemispheres 111.9
1901 Male, age 80, both hemispheres 100.6
2438 Female, age 94, left hemisphere 95.0
1977 Female, age 85, both hemispheres 88.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 52.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 52.7
Samples: 197

Max nTPM: 169.9
Min nTPM: 17.7
Std nTPM: 22.6
Median nTPM: 49.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 169.9
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 121.5
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 121.4
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 110.8
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 102.3
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 100.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 100.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 100.0
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 98.1
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 97.3
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 96.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 243.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 243.8
FF:10169-103B7 60 years, female 273.0
FF:10153-102I9 76 years, female 214.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 31.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 24.3
Samples: 4

Max nTPM: 30.4
Min nTPM: 15.3
Sample A Female 30.4
Sample B Female 24.2
Sample C Male 27.2
Sample D Male 15.3
Entorhinal cortex
nTPM: 17.9
Samples: 4

Max nTPM: 21.8
Min nTPM: 13.7
Sample A Female 21.8
Sample B Female 17.4
Sample C Male 18.7
Sample D Male 13.7
Subiculum
nTPM: 28.4
Samples: 4

Max nTPM: 34.3
Min nTPM: 21.5
Sample A Female 34.3
Sample B Female 30.2
Sample C Male 27.5
Sample D Male 21.5
Ventral hippocampus
nTPM: 31.2
Samples: 4

Max nTPM: 42.1
Min nTPM: 23.2
Sample A Female 34.0
Sample B Female 25.4
Sample C Male 42.1
Sample D Male 23.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 11.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 8.1
Samples: 4

Max nTPM: 9.1
Min nTPM: 6.4
Sample A Male 7.9
Sample B Male 6.4
Sample C Female 8.9
Sample D Female 9.1
Hippocampal formation
nTPM: 11.8
Samples: 4

Max nTPM: 12.6
Min nTPM: 10.0
Sample A Male 10.0
Sample B Male 12.1
Sample C Female 12.6
Sample D Female 12.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
69735640 Antisense, RP_050503_03_B11, Mouse strain C57BL/6J (56 days, male) 0.5
73520992 Antisense, RP_051101_02_G11, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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