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PONS AND MEDULLA - Expression summary
Mouse brain, Intensity
Ponsi 		60.763
RNA expressioni
Consensus:68.3 nTPM
HPA:68.3 nTPM
FANTOM5:122.0 Scaled Tags Per Million
Pig:46.3 nTPM
Mouse:75.7 nTPM
Allen mouse:11.5 Expression energy

PONS - Mouse brain profilei , antibody HPA063655
Pons mean intensity 60.763
intensityi
FRONT BACK
Barrington's nucleus -
Koelliker-fuse nucleus -
Motor tregiminal nucleus 34.003
Parabrachial nucleus 15.634
Principle sensory trigeminal nucleus 48.200
Locus coeruleus 57.011
Pontine nucleus 28.371
Vestibular nucleus 16.816
Pontine reticular nucleus, oral 36.123
Lateral lemniscus 44.461
Superior paraolivary nucleus 39.315

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 68.3
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 21.2
1984 Male, age 76, both hemispheres 39.9
2301 Female, age 85, both hemispheres 22.7
2188 Female, age 91, both hemispheres 13.1
2090 Male, age 80, both hemispheres 9.3
Area postrema
nTPM: 5.2
2054 Male, age 76, both hemispheres 10.9
2306 Male, age 80, both hemispheres 4.7
2799 Male, age 61, both hemispheres 0.0
Cuneate nuclei
nTPM: 30.2
2131 Male, age 76, both hemispheres 60.6
2376 Male, age 61, both hemispheres 16.7
2381 Male, age 80, both hemispheres 13.2
Dorsal cochlear nucleus
nTPM: 15.4
2058 Male, age 76, both hemispheres 22.0
2370 Male, age 61, both hemispheres 19.0
2378 Male, age 80, both hemispheres 14.0
2802 Male, age 74, right hemisphere 13.0
2187 Female, age 91, both hemispheres 9.1
Dorsal medullary reticular nucleus
nTPM: 25.7
2040 Female, age 85, both hemispheres 29.2
2088 Male, age 76, both hemispheres 27.0
2373 Male, age 61, both hemispheres 20.9
Dorsal motor vagal complex
nTPM: 12.6
2133 Female, age 91, both hemispheres 33.1
2000 Male, age 74, unknown 26.3
2185 Male, age 76, both hemispheres 18.7
2797 Male, age 61, both hemispheres 5.5
2807 Female, age 85, both hemispheres 5.3
2813 Female, age 72, unknown 4.7
2844 Male, age 55, unknown 3.6
2643 Male, age 74, both hemispheres 3.3
Dorsal tegmental nucleus
nTPM: 14.3
2083 Male, age 80, both hemispheres 22.7
1936 Male, age 76, left hemisphere 19.9
2358 Male, age 61, both hemispheres 9.2
2326 Male, age 74, both hemispheres 5.6
Dorsolateral tegmental area
nTPM: 9.8
2654 Male, age 80, both hemispheres 21.7
2751 Female, age 85, both hemispheres 15.1
2360 Male, age 74, both hemispheres 5.7
2141 Male, age 76, both hemispheres 5.5
2337 Male, age 61, both hemispheres 1.1
Gigantocellular reticular nuclei, medullary
nTPM: 38.0
2462 Male, age 74, both hemispheres 102.3
2022 Male, age 76, right hemisphere 33.2
2310 Male, age 80, both hemispheres 31.7
1876 Female, age 85, both hemispheres 27.4
2387 Female, age 91, both hemispheres 21.9
2314 Male, age 61, both hemispheres 11.7
Gigantocellular reticular nuclei, pars
nTPM: 40.5
2168 Male, age 76, both hemispheres 72.4
2084 Female, age 85, both hemispheres 37.8
2330 Male, age 80, both hemispheres 32.6
2706 Male, age 80, both hemispheres 31.7
2336 Male, age 61, both hemispheres 28.1
Inferior olive
nTPM: 7.0
2628 Female, age 91, both hemispheres 14.0
2085 Female, age 85, both hemispheres 9.7
2178 Male, age 61, both hemispheres 5.2
2379 Male, age 80, both hemispheres 4.7
2563 Male, age 74, both hemispheres 1.5
Kolliker-Fuse nucleus
nTPM: 31.8
2163 Male, age 80, both hemispheres 50.9
2793 Female, age 91, left hemisphere 32.7
2315 Male, age 76, right hemisphere 11.8
Lateral lemniscal nuclei
nTPM: 62.4
2169 Male, age 76, both hemispheres 78.6
2453 Male, age 74, right hemisphere 74.1
2036 Male, age 80, both hemispheres 65.8
2746 Female, age 85, left hemisphere 54.2
2320 Female, age 91, left hemisphere 39.5
Lateral medullary reticular nucleus
nTPM: 18.3
2044 Male, age 76, both hemispheres 50.1
2804 Female, age 91, both hemispheres 19.2
2374 Male, age 61, both hemispheres 13.0
2190 Female, age 85, both hemispheres 11.7
2852 Male, age 80, both hemispheres 9.9
2305 Male, age 74, both hemispheres 6.1
Lateral parabrachial nucleus
nTPM: 29.2
2139 Female, age 85, right hemisphere 60.7
2013 Male, age 80, both hemispheres 31.8
2790 Male, age 61, both hemispheres 16.8
2792 Male, age 76, both hemispheres 7.6
Lateral vestibular nucleus
nTPM: 32.7
2184 Male, age 76, both hemispheres 47.9
2311 Male, age 80, both hemispheres 17.5
Locus coeruleus
nTPM: 10.3
2123 Female, age 91, both hemispheres 19.3
2720 Male, age 74, both hemispheres 11.6
2162 Male, age 80, both hemispheres 9.5
2317 Female, age 72, unknown 9.1
2788 Male, age 74, unknown 8.5
2014 Male, age 55, unknown 7.1
1980 Male, age 76, both hemispheres 6.7
Medial olivary nucleus
nTPM: 4.9
2851 Male, age 80, both hemispheres 12.9
1962 Male, age 76, both hemispheres 4.4
2138 Female, age 91, both hemispheres 2.5
1943 Male, age 61, both hemispheres 0.0
Medial parabrachial nucleus
nTPM: 22.8
2854 Male, age 80, both hemispheres 31.1
2156 Male, age 61, both hemispheres 29.4
2463 Female, age 85, right hemisphere 21.9
2786 Male, age 76, both hemispheres 20.9
2170 Female, age 91, both hemispheres 10.8
Medial periolivary nuclei
nTPM: 54.7
2171 Female, age 85, both hemispheres 93.4
2063 Male, age 76, both hemispheres 80.8
2791 Male, age 74, right hemisphere 46.0
2458 Female, age 91, both hemispheres 28.1
2081 Male, age 80, both hemispheres 24.9
Medial vestibular nucleus
nTPM: 40.3
2093 Male, age 80, both hemispheres 58.3
2624 Male, age 61, both hemispheres 45.6
2803 Female, age 91, both hemispheres 43.4
2134 Male, age 76, both hemispheres 41.3
2743 Female, age 85, both hemispheres 27.0
2801 Male, age 74, both hemispheres 26.2
Motor facial nucleus
nTPM: 50.6
2062 Male, age 76, both hemispheres 84.6
2365 Male, age 74, right hemisphere 64.0
2327 Male, age 80, both hemispheres 51.8
2795 Female, age 91, both hemispheres 40.1
2697 Female, age 85, both hemispheres 38.8
2126 Male, age 61, both hemispheres 24.6
Motor hypoglossal nucleus
nTPM: 27.2
2125 Female, age 91, both hemispheres 44.0
2132 Female, age 85, both hemispheres 39.7
2461 Male, age 61, both hemispheres 37.1
2182 Male, age 80, both hemispheres 14.8
2277 Male, age 76, both hemispheres 0.3
Motor trigeminal nucleus
nTPM: 34.7
2079 Male, age 80, both hemispheres 58.6
2560 Male, age 74, both hemispheres 44.6
2309 Male, age 76, both hemispheres 31.8
2335 Male, age 61, both hemispheres 21.7
2321 Female, age 91, both hemispheres 16.8
Nuclei of the trapezoid body
nTPM: 68.3
2159 Male, age 61, both hemispheres 95.7
2735 Female, age 85, both hemispheres 86.0
1983 Male, age 76, both hemispheres 77.5
2368 Female, age 91, both hemispheres 42.2
2166 Male, age 80, both hemispheres 40.0
Nucleus ambiguus
nTPM: 23.7
2096 Female, age 85, both hemispheres 42.4
2071 Male, age 76, both hemispheres 5.0
Nucleus cuneatus
nTPM: 21.1
2100 Male, age 76, both hemispheres 68.3
2564 Male, age 74, both hemispheres 24.6
2562 Male, age 61, both hemispheres 10.9
2808 Female, age 85, both hemispheres 9.0
2380 Male, age 80, both hemispheres 6.9
2805 Female, age 91, both hemispheres 6.7
Nucleus gracilis
nTPM: 6.7
2627 Male, age 74, both hemispheres 8.5
2299 Female, age 85, both hemispheres 7.4
2382 Male, age 80, both hemispheres 4.1
Nucleus raphe magnus
nTPM: 66.0
2172 Female, age 85, both hemispheres 94.3
2455 Male, age 74, both hemispheres 82.2
2160 Male, age 61, both hemispheres 79.6
2051 Male, age 76, both hemispheres 54.5
2328 Male, age 80, both hemispheres 46.9
2459 Female, age 91, both hemispheres 38.4
Nucleus raphe obscurus
nTPM: 11.7
2800 Male, age 61, midline 22.3
2845 Female, age 85, midline 12.9
2142 Male, age 76, midline 0.0
Nucleus raphe pallidus
nTPM: 8.3
2183 Male, age 80, midline 12.3
1924 Male, age 61, midline 11.1
2145 Male, age 76, midline 1.4
Nucleus tractus solitarii
nTPM: 14.4
2144 Female, age 91, right hemisphere 36.4
2191 Female, age 85, both hemispheres 14.5
2307 Male, age 80, both hemispheres 3.6
2656 Male, age 76, both hemispheres 3.3
Paramedian reticular nucleus
nTPM: 30.4
2050 Female, age 85, both hemispheres 49.8
2057 Male, age 80, both hemispheres 30.7
2313 Male, age 61, both hemispheres 23.9
2052 Male, age 76, both hemispheres 17.4
Parvicellular reticular nuclei
nTPM: 50.1
2558 Male, age 74, both hemispheres 80.4
2095 Male, age 76, both hemispheres 39.6
2119 Male, age 80, both hemispheres 30.4
Parvicellular reticular nuclei, medullary
nTPM: 30.0
2189 Female, age 91, both hemispheres 35.9
2091 Female, age 85, both hemispheres 34.2
2181 Male, age 80, left hemisphere 19.8
Peritrigeminal nucleus
nTPM: 34.0
2136 Male, age 76, both hemispheres 40.5
2067 Female, age 85, both hemispheres 30.9
2179 Male, age 61, both hemispheres 30.5
Pontine nuclei
nTPM: 53.8
2787 Female, age 85, both hemispheres 89.5
1968 Male, age 76, left hemisphere 77.1
2727 Male, age 61, right hemisphere 69.0
1863 Male, age 55, unknown 64.0
2109 Female, age 72, unknown 40.7
2115 Male, age 80, left hemisphere 35.6
2454 Male, age 74, left hemisphere 34.3
2319 Female, age 91, both hemispheres 20.4
Pontine raphe nucleus
nTPM: 27.8
2122 Female, age 85, midline 55.0
2853 Male, age 76, midline 0.7
Posteroventral cochlear nucleus
nTPM: 19.8
2752 Female, age 85, both hemispheres 36.1
2070 Male, age 76, both hemispheres 28.5
2371 Male, age 61, both hemispheres 18.2
2341 Male, age 80, both hemispheres 16.4
2135 Female, age 91, both hemispheres 0.0
Prepositus hypoglossal nucleus
nTPM: 23.7
2855 Female, age 85, right hemisphere 29.8
2086 Male, age 80, both hemispheres 17.6
Principal sensory trigeminal nucleus
nTPM: 50.1
2158 Male, age 61, both hemispheres 68.8
2008 Male, age 80, left hemisphere 64.0
2324 Male, age 76, both hemispheres 39.6
2367 Female, age 91, left hemisphere 27.9
Reticular pontine nucleus, caudal
nTPM: 36.7
2332 Male, age 80, right hemisphere 62.2
2092 Male, age 76, both hemispheres 45.8
2457 Female, age 91, both hemispheres 27.0
2559 Male, age 74, both hemispheres 11.6
Reticular pontine nucleus, oral
nTPM: 30.5
2361 Male, age 74, both hemispheres 50.0
2012 Female, age 85, both hemispheres 43.0
2366 Female, age 91, both hemispheres 23.6
1939 Male, age 80, both hemispheres 18.1
2167 Male, age 76, both hemispheres 17.7
Reticulotegmental nucleus
nTPM: 29.6
2325 Male, age 76, both hemispheres 40.4
2333 Male, age 80, both hemispheres 30.0
2452 Male, age 74, both hemispheres 28.8
2322 Female, age 91, both hemispheres 19.0
Spinal trigeminal nucleus, caudal
nTPM: 32.5
2390 Female, age 91, both hemispheres 61.5
2447 Male, age 76, both hemispheres 58.7
2312 Male, age 61, both hemispheres 16.4
2308 Male, age 80, both hemispheres 15.0
2642 Male, age 74, both hemispheres 10.9
Spinal trigeminal nucleus, interpolar
nTPM: 50.2
2625 Male, age 61, both hemispheres 86.3
2066 Male, age 76, right hemisphere 68.0
2389 Female, age 91, both hemispheres 37.8
2386 Female, age 85, both hemispheres 30.6
2033 Male, age 80, both hemispheres 28.3
Spinal trigeminal nucleus, oral
nTPM: 34.7
2164 Male, age 80, both hemispheres 42.6
2737 Female, age 85, both hemispheres 40.6
1978 Male, age 76, both hemispheres 20.8
Spinal vestibular nucleus
nTPM: 33.2
2186 Female, age 91, both hemispheres 47.1
2780 Male, age 80, both hemispheres 41.1
2796 Male, age 61, both hemispheres 36.1
2748 Male, age 76, both hemispheres 34.8
2806 Female, age 85, both hemispheres 30.7
2384 Male, age 74, both hemispheres 9.5
Subcoeruleus area
nTPM: 22.5
2089 Male, age 76, left hemisphere 52.6
1958 Male, age 80, both hemispheres 38.0
2323 Female, age 91, left hemisphere 11.3
2369 Female, age 85, left hemisphere 5.5
2451 Male, age 74, both hemispheres 5.2
Superior olive
nTPM: 45.9
1875 Female, age 85, both hemispheres 64.4
2020 Male, age 76, both hemispheres 45.4
2561 Female, age 91, both hemispheres 41.0
2364 Male, age 74, right hemisphere 40.2
2329 Male, age 80, right hemisphere 38.2
Superior vestibular nucleus
nTPM: 14.5
2015 Male, age 80, both hemispheres 24.4
2061 Male, age 76, both hemispheres 13.4
2383 Male, age 74, both hemispheres 5.9
Ventral medullary reticular nucleus
nTPM: 18.6
2060 Male, age 76, both hemispheres 24.2
2372 Male, age 61, both hemispheres 13.0
Ventral periolivary nuclei
nTPM: 59.9
2130 Female, age 85, both hemispheres 80.0
2165 Male, age 80, both hemispheres 63.6
2794 Female, age 91, left hemisphere 54.4
2023 Male, age 76, both hemispheres 41.7
Ventrolateral medulla, A1-C1 cell groups
nTPM: 27.3
1986 Male, age 76, both hemispheres 47.0
2741 Female, age 85, both hemispheres 39.6
2302 Female, age 91, both hemispheres 23.6
2180 Male, age 61, both hemispheres 15.3
2118 Male, age 80, both hemispheres 10.9
Ventrolateral tegmental area, A5 NE cell group
nTPM: 37.8
2449 Male, age 74, both hemispheres 69.6
1959 Male, age 76, both hemispheres 49.5
2840 Female, age 85, both hemispheres 41.0
2161 Male, age 80, both hemispheres 36.1
2456 Female, age 91, both hemispheres 22.0
2359 Male, age 61, both hemispheres 8.7

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 122.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 69.4
FF:10182-103D2 60 years, female 117.9
FF:10165-103B3 76 years, female 20.9
Medulla oblongata
Scaled Tags Per Million: 30.9
FF:10038-101F2 18-64 years, mixed 54.1
FF:10155-103A2 76 years, female 20.4
FF:10174-103C3 60 years, female 18.0
Pons
Scaled Tags Per Million: 122.0
FF:10033-101E6 18-54 years, mixed 122.0

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 46.3
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 46.3
Samples: 4

Max nTPM: 63.2
Min nTPM: 9.2
Sample A Female 55.8
Sample B Female 63.2
Sample C Male 57.0
Sample D Male 9.2
Pons
nTPM: 31.0
Samples: 4

Max nTPM: 73.9
Min nTPM: 15.6
Sample A Female 17.4
Sample B Female 15.6
Sample C Male 17.0
Sample D Male 73.9

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 75.7
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 75.7
Samples: 4

Max nTPM: 81.8
Min nTPM: 67.3
Sample A Male 77.9
Sample B Male 81.8
Sample C Female 67.3
Sample D Female 75.7

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 11.5
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 11.5
1023 Antisense, RP_040526_02_F08, Mouse strain C57BL/6J (56 days, male) 18.8
77454656 Antisense, RP_070129_01_B12, Mouse strain C57BL/6J (56 days, male) 14.3
71152527 Antisense, RP_050719_04_B09, Mouse strain C57BL/6J (56 days, male) 12.8
1025 Sense, RPS_Baylor_37050, Mouse strain C57BL/6J (56 days, male) 0.0
Pons
Expression energy: 9.9
1023 Antisense, RP_040526_02_F08, Mouse strain C57BL/6J (56 days, male) 18.8
77454656 Antisense, RP_070129_01_B12, Mouse strain C57BL/6J (56 days, male) 10.4
71152527 Antisense, RP_050719_04_B09, Mouse strain C57BL/6J (56 days, male) 10.3
1025 Sense, RPS_Baylor_37050, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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