Brain tissue expression of IQSEC1 in retina

RETINA - Expression summary

Protein expressionⁱ

No data

RNA expressionⁱ

Consensus:	56.3	nTPM
GTEx:	56.3	nTPM
FANTOM5:	84.8	Scaled Tags Per Million

Pig:	46.3	nTPM
Mouse:	30.0	nTPM

RETINA - GTEx RNA-seqⁱ

Average nTPM	56.3

GTEx sample id

Sample description

nTPM

Retina
Average nTPM: 56.3

Samples: 105

Max nTPM: 113.0
Min nTPM: 29.7
Std nTPM: 13.2
Median nTPM:

218_1	71 years, female	113.0
322_1	76 years, male	96.4
316_1	62 years, male	94.8
352_1	62 years, male	89.8
319_1	81 years, male	80.5
320_1	89 years, female	79.4
237_1	82 years, male	75.1
354_1	81 years, female	74.2
375_1	74 years, female	70.7
353_1	82 years, female	69.7
379_1	60 years, male	69.3
163_1	78 years, male	68.6
350_1	84 years, female	68.1
318_1	68 years, male	67.8
2_1	77 years, female	67.5
376_1	75 years, female	67.5
6_1	73 years, female	67.3
405_1	91 years, male	67.1
335_1	73 years, female	66.7
172_1	72 years, female	66.5
406_1	79 years, male	66.5
243_1	75 years, male	66.2
229_1	69 years, female	65.0
35_1	74 years, female	64.9
286_1	68 years, female	64.3
386_1	76 years, male	64.1
355_1	70 years, female	63.9
356_1	87 years, female	63.7
518_1	75 years, female	63.1
425_1	59 years, female	62.6
377_1	82 years, female	62.4
349_1	83 years, male	62.1
480_1	63 years, male	61.7
396_1	62 years, male	61.2
321_1	62 years, female	60.9
351_1	91 years, male	60.3
348_1	84 years, male	60.1
506_1	65 years, male	60.1
293_1	68 years, female	60.0
292_1	71 years, male	59.9
404_1	82 years, female	59.8
347_1	72 years, male	59.7
251_1	78 years, male	59.2
4_1	88 years, female	57.0
139_1	64 years, female	56.8
307_1	66 years, female	56.8
389_1	86 years, female	56.3
394_1	75 years, female	56.1
142_1	61 years, female	55.8
447_1	81 years, male	55.7
452_1	88 years, female	55.1
264_1	73 years, female	54.2
173_1	67 years, male	53.9
495_1	57 years, female	52.8
17_1	71 years, male	52.7
295_1	61 years, female	52.5
177_1	74 years, male	52.4
217_1	76 years, male	52.4
384_1	83 years, male	52.3
526_1	61 years, male	52.0
266_1	85 years, male	51.9
517_1	88 years, male	51.7
503_1	68 years, male	51.2
291_1	76 years, male	50.7
153_1	70 years, female	50.6
468_1	89 years, male	49.9
324_1	76 years, male	49.7
43_1	64 years, female	49.3
189_1	76 years, male	49.2
145_1	84 years, male	49.1
246_1	77 years, male	49.1
313_1	79 years, female	49.0
81_1	67 years, male	48.8
126_1	63 years, male	48.4
265_1	87 years, male	48.4
137_1	83 years, male	48.0
311_1	78 years, male	48.0
41_1	94 years, female	47.9
117_1	61 years, male	47.8
99_1	64 years, male	47.6
288_1	66 years, female	47.4
499_1	55 years, female	47.2
413_1	59 years, female	46.7
120_1	70 years, female	46.6
490_1	67 years, female	46.5
18_1	88 years, male	45.7
115_1	83 years, male	45.4
9_1	66 years, female	45.2
42_1	85 years, male	45.1
314_1	67 years, male	44.3
466_1	57 years, female	43.4
501_1	88 years, male	43.2
109_1	81 years, female	42.6
415_1	77 years, female	42.6
162_1	79 years, female	42.4
254_1	77 years, female	42.2
315_1	62 years, female	41.1
317_1	60 years, male	40.9
32_1	67 years, male	39.3
414_1	84 years, female	39.2
491_1	89 years, female	37.5
119_1	70 years, female	37.3
89_1	63 years, male	36.7
149_1	88 years, male	35.6
308_1	70 years, female	29.7
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RETINA - FANTOM5 CAGEⁱ

Max Scaled Tags Per Million	84.8

FANTOM5 sample id

Sample description

Scaled Tags Per Million

Retina
Scaled Tags Per Million: 84.8

FF:10030-101E3

24-65 years, mixed

84.8

RETINA - Pig RNA-seqⁱ

Average nTPM	46.3

Pig sample

Sample description

nTPM

Retina
nTPM: 46.3

Samples: 4

Max nTPM: 48.9
Min nTPM: 43.2

Sample A	Female	47.9
Sample B	Female	45.3
Sample C	Male	48.9
Sample D	Male	43.2

RETINA - Mouse RNA-seqⁱ

Average nTPM	30.0

Mouse sample

Sample description

nTPM

Retina
nTPM: 30.1

Samples: 4

Max nTPM: 37.3
Min nTPM: 20.8

Sample A	Male	35.1
Sample B	Male	27.1
Sample C	Female	20.8
Sample D	Female	37.3