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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:318.0 nTPM
HPA:318.0 nTPM
GTEx:234.1 nTPM
FANTOM5:119.8 Scaled Tags Per Million
Pig:239.7 nTPM
Mouse:374.5 nTPM
Allen mouse:11.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA062620
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 318.0
Sample id Sample description nTPM
Hippocampus
nTPM: 217.0
1898 Male, age 80, left hemisphere 249.3
1855 Male, age 76, left hemisphere 217.0
1911 Female, age 85, right hemisphere 212.9
2621 Female, age 67, right hemisphere 208.5
2148 Female, age 91, left hemisphere 207.9
2529 Female, age 94, left hemisphere 206.5
Dentate gyrus
nTPM: 223.2
1927 Female, age 91, both hemispheres 253.2
2246 Female, age 85, both hemispheres 236.2
2531 Female, age 67, both hemispheres 225.7
2528 Male, age 74, both hemispheres 224.1
2530 Female, age 94, left hemisphere 200.8
2010 Male, age 76, both hemispheres 199.1
Entorhinal gyrus
nTPM: 264.8
2613 Female, age 94, left hemisphere 312.8
2764 Male, age 80, right hemisphere 282.1
1938 Female, age 85, left hemisphere 273.6
1787 Male, age 76, left hemisphere 253.1
2686 Male, age 75, right hemisphere 250.3
2117 Female, age 91, right hemisphere 216.8
Hippocampus, CA1
nTPM: 240.1
2749 Male, age 80, left hemisphere 293.1
2082 Female, age 91, right hemisphere 247.3
2045 Male, age 76, both hemispheres 233.1
1873 Female, age 85, both hemispheres 213.9
2527 Male, age 74, both hemispheres 213.1
Hippocampus, CA2
nTPM: 227.3
1892 Male, age 76, both hemispheres 264.3
2437 Female, age 94, left hemisphere 239.3
2113 Female, age 91, right hemisphere 234.5
1940 Female, age 85, left hemisphere 219.3
2249 Male, age 74, both hemispheres 211.9
1963 Male, age 80, left hemisphere 194.7
Hippocampus, CA3
nTPM: 248.1
2137 Male, age 80, left hemisphere 301.8
1867 Male, age 76, both hemispheres 272.7
2620 Female, age 94, left hemisphere 255.2
1891 Female, age 85, both hemispheres 229.4
2436 Male, age 74, both hemispheres 216.6
2861 Female, age 67, both hemispheres 213.2
Parahippocampal cortex
nTPM: 271.0
1850 Male, age 80, both hemispheres 299.7
2693 Female, age 94, both hemispheres 295.5
2245 Female, age 91, both hemispheres 289.8
1990 Female, age 91, right hemisphere 289.0
2250 Female, age 67, right hemisphere 279.0
2018 Male, age 76, both hemispheres 264.9
2532 Female, age 72, left hemisphere 262.1
1933 Female, age 85, both hemispheres 261.7
2622 Female, age 67, right hemisphere 239.2
2692 Male, age 74, both hemispheres 228.8
Perirhinal gyrus
nTPM: 318.0
1847 Female, age 91, left hemisphere 385.5
2521 Female, age 94, right hemisphere 338.6
1794 Male, age 80, right hemisphere 303.9
1841 Female, age 85, right hemisphere 291.7
2848 Male, age 76, right hemisphere 270.3
Subiculum
nTPM: 236.3
1901 Male, age 80, both hemispheres 270.9
1977 Female, age 85, both hemispheres 266.3
2438 Female, age 94, left hemisphere 229.3
2042 Male, age 76, both hemispheres 224.2
2619 Male, age 74, both hemispheres 222.0
2729 Female, age 91, right hemisphere 204.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 234.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 234.1
Samples: 197

Max nTPM: 823.3
Min nTPM: 16.5
Std nTPM: 157.6
Median nTPM: 207.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 823.3
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 773.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 731.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 682.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 643.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 641.3
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 612.2
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 566.6
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 560.8
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 533.0
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 531.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 119.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 119.8
FF:10169-103B7 60 years, female 160.0
FF:10153-102I9 76 years, female 79.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 239.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 239.7
Samples: 4

Max nTPM: 319.0
Min nTPM: 183.0
Sample A Female 319.0
Sample B Female 265.7
Sample C Male 183.0
Sample D Male 191.2
Entorhinal cortex
nTPM: 179.1
Samples: 4

Max nTPM: 202.7
Min nTPM: 156.9
Sample A Female 202.7
Sample B Female 187.7
Sample C Male 156.9
Sample D Male 168.9
Subiculum
nTPM: 177.7
Samples: 4

Max nTPM: 251.6
Min nTPM: 144.5
Sample A Female 251.6
Sample B Female 150.0
Sample C Male 164.8
Sample D Male 144.5
Ventral hippocampus
nTPM: 233.8
Samples: 4

Max nTPM: 298.7
Min nTPM: 145.4
Sample A Female 243.2
Sample B Female 145.4
Sample C Male 248.0
Sample D Male 298.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 374.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 374.5
Samples: 4

Max nTPM: 404.8
Min nTPM: 353.8
Sample A Male 353.8
Sample B Male 404.8
Sample C Female 367.7
Sample D Female 371.6
Hippocampal formation
nTPM: 344.0
Samples: 4

Max nTPM: 365.4
Min nTPM: 316.6
Sample A Male 365.4
Sample B Male 316.6
Sample C Female 354.4
Sample D Female 339.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.0
75988633 Antisense, RP_060620_02_E05, Mouse strain C57BL/6J (56 days, male) 12.9
71280733 Antisense, RP_050818_01_E04, Mouse strain C57BL/6J (56 days, male) 9.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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