ABOUTMENU
HELP
NEWS
TCTA
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni
Consensus:48.4 nTPM
HPA:48.4 nTPM
GTEx:36.6 nTPM
FANTOM5:33.5 Scaled Tags Per Million
Pig:9.4 nTPM
Mouse:48.3 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007342
Glial cells Medium
Neuronal cells Low


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 48.4
Sample id Sample description nTPM
Hippocampus
nTPM: 47.8
1855 Male, age 76, left hemisphere 50.7
1898 Male, age 80, left hemisphere 49.6
2148 Female, age 91, left hemisphere 47.6
2621 Female, age 67, right hemisphere 46.4
2529 Female, age 94, left hemisphere 46.3
1911 Female, age 85, right hemisphere 46.1
Dentate gyrus
nTPM: 47.0
2010 Male, age 76, both hemispheres 49.1
2530 Female, age 94, left hemisphere 48.4
2528 Male, age 74, both hemispheres 47.6
1927 Female, age 91, both hemispheres 46.0
2246 Female, age 85, both hemispheres 45.6
2531 Female, age 67, both hemispheres 45.5
Entorhinal gyrus
nTPM: 48.4
2764 Male, age 80, right hemisphere 50.3
2686 Male, age 75, right hemisphere 49.0
1938 Female, age 85, left hemisphere 48.8
2613 Female, age 94, left hemisphere 48.3
2117 Female, age 91, right hemisphere 47.5
1787 Male, age 76, left hemisphere 46.8
Hippocampus, CA1
nTPM: 47.4
2749 Male, age 80, left hemisphere 51.8
1873 Female, age 85, both hemispheres 48.0
2045 Male, age 76, both hemispheres 45.8
2082 Female, age 91, right hemisphere 45.8
2527 Male, age 74, both hemispheres 45.8
Hippocampus, CA2
nTPM: 47.8
1892 Male, age 76, both hemispheres 50.3
1963 Male, age 80, left hemisphere 49.9
2437 Female, age 94, left hemisphere 47.7
2113 Female, age 91, right hemisphere 46.3
2249 Male, age 74, both hemispheres 46.3
1940 Female, age 85, left hemisphere 46.2
Hippocampus, CA3
nTPM: 46.9
1867 Male, age 76, both hemispheres 48.2
2861 Female, age 67, both hemispheres 47.7
2137 Male, age 80, left hemisphere 47.5
2436 Male, age 74, both hemispheres 46.3
1891 Female, age 85, both hemispheres 46.1
2620 Female, age 94, left hemisphere 45.8
Parahippocampal cortex
nTPM: 47.1
1850 Male, age 80, both hemispheres 49.6
2692 Male, age 74, both hemispheres 48.8
1933 Female, age 85, both hemispheres 48.1
2622 Female, age 67, right hemisphere 47.8
2532 Female, age 72, left hemisphere 47.7
2018 Male, age 76, both hemispheres 46.7
2693 Female, age 94, both hemispheres 46.2
2245 Female, age 91, both hemispheres 46.0
1990 Female, age 91, right hemisphere 45.5
2250 Female, age 67, right hemisphere 44.4
Perirhinal gyrus
nTPM: 47.7
1847 Female, age 91, left hemisphere 48.9
1794 Male, age 80, right hemisphere 48.7
1841 Female, age 85, right hemisphere 47.3
2521 Female, age 94, right hemisphere 46.8
2848 Male, age 76, right hemisphere 46.7
Subiculum
nTPM: 46.8
2619 Male, age 74, both hemispheres 47.9
1901 Male, age 80, both hemispheres 46.9
2042 Male, age 76, both hemispheres 46.9
1977 Female, age 85, both hemispheres 46.5
2438 Female, age 94, left hemisphere 46.3
2729 Female, age 91, right hemisphere 46.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 36.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 36.6
Samples: 197

Max nTPM: 60.2
Min nTPM: 18.6
Std nTPM: 7.1
Median nTPM: 36.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 60.2
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 55.3
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 53.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 53.4
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 52.9
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 52.5
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 51.0
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 50.3
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 50.0
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 49.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 49.4
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 33.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 33.5
FF:10169-103B7 60 years, female 37.6
FF:10153-102I9 76 years, female 29.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 9.2
Samples: 4

Max nTPM: 11.2
Min nTPM: 7.6
Sample A Female 11.2
Sample B Female 9.3
Sample C Male 8.8
Sample D Male 7.6
Entorhinal cortex
nTPM: 8.4
Samples: 4

Max nTPM: 9.1
Min nTPM: 7.5
Sample A Female 8.4
Sample B Female 8.7
Sample C Male 9.1
Sample D Male 7.5
Subiculum
nTPM: 8.6
Samples: 4

Max nTPM: 9.8
Min nTPM: 7.9
Sample A Female 9.8
Sample B Female 7.9
Sample C Male 8.6
Sample D Male 8.1
Ventral hippocampus
nTPM: 9.4
Samples: 4

Max nTPM: 11.9
Min nTPM: 7.2
Sample A Female 9.9
Sample B Female 7.2
Sample C Male 11.9
Sample D Male 8.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 48.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 45.8
Samples: 4

Max nTPM: 47.0
Min nTPM: 44.7
Sample A Male 45.1
Sample B Male 46.3
Sample C Female 47.0
Sample D Female 44.7
Hippocampal formation
nTPM: 48.3
Samples: 4

Max nTPM: 61.7
Min nTPM: 42.7
Sample A Male 61.7
Sample B Male 42.7
Sample C Female 43.6
Sample D Female 45.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
68633377 Antisense, RP_050125_02_G04, Mouse strain C57BL/6J (56 days, male) 1.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.