ABOUTMENU
HELP
NEWS
VWA5B2
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:6.5 nTPM
HPA:6.5 nTPM
GTEx:20.0 nTPM
FANTOM5:0.0 Scaled Tags Per Million
Pig:5.7 nTPM
Mouse:8.8 nTPM
Allen mouse:1.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036823Antibody HPA036824Antibody HPA061412
Glial cells LowNot detectedNot detected
Neuronal cells Not detectedMediumLow




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 6.5
Sample id Sample description nTPM
Hippocampus
nTPM: 2.4
2621 Female, age 67, right hemisphere 5.3
2148 Female, age 91, left hemisphere 5.2
1911 Female, age 85, right hemisphere 3.7
1898 Male, age 80, left hemisphere 0.4
1855 Male, age 76, left hemisphere 0.0
2529 Female, age 94, left hemisphere 0.0
Dentate gyrus
nTPM: 6.5
2530 Female, age 94, left hemisphere 13.2
2531 Female, age 67, both hemispheres 12.9
2528 Male, age 74, both hemispheres 6.7
2246 Female, age 85, both hemispheres 4.3
1927 Female, age 91, both hemispheres 1.9
2010 Male, age 76, both hemispheres 0.0
Entorhinal gyrus
nTPM: 4.7
2613 Female, age 94, left hemisphere 15.9
2764 Male, age 80, right hemisphere 5.9
2686 Male, age 75, right hemisphere 3.0
1787 Male, age 76, left hemisphere 2.6
1938 Female, age 85, left hemisphere 1.0
2117 Female, age 91, right hemisphere 0.0
Hippocampus, CA1
nTPM: 3.3
2045 Male, age 76, both hemispheres 6.0
2527 Male, age 74, both hemispheres 5.1
2082 Female, age 91, right hemisphere 2.9
1873 Female, age 85, both hemispheres 2.8
2749 Male, age 80, left hemisphere 0.0
Hippocampus, CA2
nTPM: 3.2
2249 Male, age 74, both hemispheres 10.0
2437 Female, age 94, left hemisphere 6.4
1940 Female, age 85, left hemisphere 1.8
2113 Female, age 91, right hemisphere 1.1
1892 Male, age 76, both hemispheres 0.0
1963 Male, age 80, left hemisphere 0.0
Hippocampus, CA3
nTPM: 4.7
2861 Female, age 67, both hemispheres 18.8
2620 Female, age 94, left hemisphere 9.0
2436 Male, age 74, both hemispheres 0.4
1867 Male, age 76, both hemispheres 0.0
1891 Female, age 85, both hemispheres 0.0
2137 Male, age 80, left hemisphere 0.0
Parahippocampal cortex
nTPM: 3.9
2622 Female, age 67, right hemisphere 10.4
2692 Male, age 74, both hemispheres 10.2
2250 Female, age 67, right hemisphere 6.7
1990 Female, age 91, right hemisphere 4.3
2245 Female, age 91, both hemispheres 3.0
2532 Female, age 72, left hemisphere 2.1
2693 Female, age 94, both hemispheres 1.5
1933 Female, age 85, both hemispheres 1.3
1850 Male, age 80, both hemispheres 0.0
2018 Male, age 76, both hemispheres 0.0
Perirhinal gyrus
nTPM: 0.9
1847 Female, age 91, left hemisphere 2.2
2521 Female, age 94, right hemisphere 2.1
2848 Male, age 76, right hemisphere 0.2
1794 Male, age 80, right hemisphere 0.0
1841 Female, age 85, right hemisphere 0.0
Subiculum
nTPM: 1.5
2619 Male, age 74, both hemispheres 4.9
2729 Female, age 91, right hemisphere 2.5
1977 Female, age 85, both hemispheres 1.7
1901 Male, age 80, both hemispheres 0.0
2042 Male, age 76, both hemispheres 0.0
2438 Female, age 94, left hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.0
Samples: 197

Max nTPM: 67.9
Min nTPM: 1.0
Std nTPM: 12.6
Median nTPM: 17.5
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 67.9
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 64.6
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 59.2
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 58.7
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 51.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 51.2
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 49.8
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 48.3
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 48.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 47.0
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 44.9
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 0.0
FF:10169-103B7 60 years, female 0.0
FF:10153-102I9 76 years, female 0.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 5.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 2.9
Samples: 4

Max nTPM: 4.0
Min nTPM: 2.1
Sample A Female 2.4
Sample B Female 3.0
Sample C Male 2.1
Sample D Male 4.0
Entorhinal cortex
nTPM: 5.7
Samples: 4

Max nTPM: 7.7
Min nTPM: 4.2
Sample A Female 4.8
Sample B Female 6.2
Sample C Male 4.2
Sample D Male 7.7
Subiculum
nTPM: 4.0
Samples: 4

Max nTPM: 4.8
Min nTPM: 3.5
Sample A Female 4.8
Sample B Female 3.6
Sample C Male 3.9
Sample D Male 3.5
Ventral hippocampus
nTPM: 4.4
Samples: 4

Max nTPM: 6.2
Min nTPM: 2.0
Sample A Female 6.2
Sample B Female 3.7
Sample C Male 5.7
Sample D Male 2.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 8.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 8.8
Samples: 4

Max nTPM: 10.2
Min nTPM: 6.8
Sample A Male 9.6
Sample B Male 10.2
Sample C Female 8.5
Sample D Female 6.8
Hippocampal formation
nTPM: 4.5
Samples: 4

Max nTPM: 6.2
Min nTPM: 2.7
Sample A Male 4.7
Sample B Male 4.5
Sample C Female 2.7
Sample D Female 6.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.7
73636029 Antisense, RP_050816_02_G03, Mouse strain C57BL/6J (56 days, male) 1.7
71212066 Antisense, RP_050816_02_G03, Mouse strain C57BL/6J (56 days, male) 1.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.