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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:34.0 nTPM
HPA:34.0 nTPM
GTEx:72.7 nTPM
FANTOM5:116.2 Scaled Tags Per Million
Mouse:10.4 nTPM
Allen mouse:2.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036455
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 34.0
Sample id Sample description nTPM
Hippocampus
nTPM: 33.8
1898 Male, age 80, left hemisphere 36.2
2529 Female, age 94, left hemisphere 34.7
1911 Female, age 85, right hemisphere 33.3
2148 Female, age 91, left hemisphere 33.3
2621 Female, age 67, right hemisphere 32.9
1855 Male, age 76, left hemisphere 32.4
Dentate gyrus
nTPM: 33.3
2530 Female, age 94, left hemisphere 34.9
2010 Male, age 76, both hemispheres 34.7
2528 Male, age 74, both hemispheres 33.2
1927 Female, age 91, both hemispheres 32.6
2246 Female, age 85, both hemispheres 32.6
2531 Female, age 67, both hemispheres 31.8
Entorhinal gyrus
nTPM: 33.0
2117 Female, age 91, right hemisphere 35.9
1938 Female, age 85, left hemisphere 33.7
2764 Male, age 80, right hemisphere 33.6
1787 Male, age 76, left hemisphere 33.1
2686 Male, age 75, right hemisphere 31.4
2613 Female, age 94, left hemisphere 30.3
Hippocampus, CA1
nTPM: 34.0
2749 Male, age 80, left hemisphere 37.4
2527 Male, age 74, both hemispheres 34.9
1873 Female, age 85, both hemispheres 34.0
2082 Female, age 91, right hemisphere 32.0
2045 Male, age 76, both hemispheres 31.8
Hippocampus, CA2
nTPM: 33.7
1963 Male, age 80, left hemisphere 34.9
2249 Male, age 74, both hemispheres 34.9
1892 Male, age 76, both hemispheres 34.2
2437 Female, age 94, left hemisphere 33.3
1940 Female, age 85, left hemisphere 32.5
2113 Female, age 91, right hemisphere 32.3
Hippocampus, CA3
nTPM: 33.2
2137 Male, age 80, left hemisphere 35.0
1867 Male, age 76, both hemispheres 34.4
1891 Female, age 85, both hemispheres 34.1
2436 Male, age 74, both hemispheres 33.3
2620 Female, age 94, left hemisphere 31.7
2861 Female, age 67, both hemispheres 30.9
Parahippocampal cortex
nTPM: 32.5
1990 Female, age 91, right hemisphere 33.8
1850 Male, age 80, both hemispheres 33.6
1933 Female, age 85, both hemispheres 33.3
2018 Male, age 76, both hemispheres 33.3
2245 Female, age 91, both hemispheres 33.1
2250 Female, age 67, right hemisphere 32.9
2532 Female, age 72, left hemisphere 32.1
2692 Male, age 74, both hemispheres 31.7
2693 Female, age 94, both hemispheres 30.9
2622 Female, age 67, right hemisphere 30.6
Perirhinal gyrus
nTPM: 33.4
1794 Male, age 80, right hemisphere 34.3
1841 Female, age 85, right hemisphere 34.0
1847 Female, age 91, left hemisphere 33.6
2848 Male, age 76, right hemisphere 32.7
2521 Female, age 94, right hemisphere 32.6
Subiculum
nTPM: 33.9
1977 Female, age 85, both hemispheres 35.0
1901 Male, age 80, both hemispheres 34.9
2042 Male, age 76, both hemispheres 33.9
2438 Female, age 94, left hemisphere 33.7
2619 Male, age 74, both hemispheres 33.0
2729 Female, age 91, right hemisphere 32.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 72.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 72.7
Samples: 197

Max nTPM: 144.7
Min nTPM: 32.3
Std nTPM: 14.8
Median nTPM: 71.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 144.7
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 141.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 111.1
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 109.2
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 106.5
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 106.2
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 102.7
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 101.7
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 101.1
GTEX-1HSKV-0011-R1b-SM-CMKH7 60-69 years, male 99.5
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 96.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 116.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 116.2
FF:10169-103B7 60 years, female 130.7
FF:10153-102I9 76 years, female 101.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 10.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.4
Samples: 4

Max nTPM: 11.5
Min nTPM: 9.0
Sample A Male 11.5
Sample B Male 9.9
Sample C Female 11.2
Sample D Female 9.0
Hippocampal formation
nTPM: 10.1
Samples: 4

Max nTPM: 11.1
Min nTPM: 9.2
Sample A Male 11.1
Sample B Male 9.2
Sample C Female 9.5
Sample D Female 10.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.2
276271 Antisense, RP_040609_01_D04, Mouse strain C57BL/6J (56 days, male) 2.2
227746 Antisense, RP_040609_01_D04, Mouse strain C57BL/6J (56 days, male) 0.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.