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AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		89.318
RNA expressioni
Consensus:94.9 nTPM
HPA:94.9 nTPM
GTEx:86.8 nTPM
FANTOM5:381.7 Scaled Tags Per Million
Pig:169.4 nTPM
Mouse:133.4 nTPM
Allen mouse:20.7 Expression energy

AMYGDALA - Mouse brain profilei , antibody CAB015178
Amygdala mean intensity 89.318
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract -
Basal medial amygdaloid nucleus 79.772
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 46.573
Cortical amygdala 89.318
Central amygdala 50.833
Medial amygdaloid nucleus 68.449

AMYGDALA - HPA Brain RNA-seq
Max nTPM 94.9
Sample id Sample description nTPM
Amygdala
nTPM: 53.2
2814 Male, age 76, right hemisphere 77.0
2517 Female, age 94, left hemisphere 60.0
1987 Female, age 91, left hemisphere 52.5
2514 Male, age 75, right hemisphere 41.3
2695 Female, age 67, right hemisphere 35.2
Basal amygdala
nTPM: 60.0
2243 Female, age 91, right hemisphere 85.4
1955 Male, age 76, both hemispheres 70.7
2110 Male, age 80, left hemisphere 69.3
2685 Female, age 94, left hemisphere 65.0
2609 Male, age 75, right hemisphere 58.9
2827 Female, age 67, right hemisphere 10.7
Central amygdala
nTPM: 54.7
1905 Male, age 76, both hemispheres 83.0
2239 Male, age 80, left hemisphere 76.4
2701 Female, age 91, right hemisphere 58.2
2515 Male, age 75, right hemisphere 42.2
2826 Female, age 94, left hemisphere 13.8
Corticomedial amygdala
nTPM: 67.9
2829 Male, age 80, left hemisphere 82.2
2242 Female, age 91, right hemisphere 80.7
2240 Male, age 76, both hemispheres 78.6
2429 Female, age 94, left hemisphere 75.8
2428 Male, age 75, right hemisphere 51.5
2535 Female, age 67, right hemisphere 38.6
Lateral amygdala
nTPM: 46.1
1883 Male, age 76, both hemispheres 106.4
2516 Male, age 75, right hemisphere 50.1
2255 Female, age 91, right hemisphere 43.4
2534 Female, age 94, left hemisphere 43.0
2256 Male, age 80, left hemisphere 33.9
2830 Female, age 67, right hemisphere 0.0
Stria terminalis, bed nucleus
nTPM: 94.9
2486 Female, age 94, both hemispheres 123.1
1974 Female, age 91, both hemispheres 113.3
2201 Male, age 74, unknown 48.3

AMYGDALA - GTEx RNA-seqi
Average nTPM 86.8
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 86.8
Samples: 152

Max nTPM: 155.3
Min nTPM: 7.1
Std nTPM: 27.2
Median nTPM: 84.6
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 155.3
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 150.5
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 149.1
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 146.9
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 137.0
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 135.8
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 133.7
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 132.0
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 130.7
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 129.3
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 128.2
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 381.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 381.7
FF:10151-102I7 76 years, female 381.7

AMYGDALA - Pig RNA-seqi
Average nTPM 169.4
Pig sample Sample description nTPM
Amygdala
nTPM: 169.4
Samples: 4

Max nTPM: 193.7
Min nTPM: 134.8
Sample A Female 193.2
Sample B Female 134.8
Sample C Male 155.9
Sample D Male 193.7

AMYGDALA - Mouse RNA-seqi
Average nTPM 133.4
Mouse sample Sample description nTPM
Amygdala
nTPM: 133.4
Samples: 4

Max nTPM: 139.2
Min nTPM: 125.6
Sample A Male 139.2
Sample B Male 125.6
Sample C Female 132.1
Sample D Female 136.6

AMYGDALA - Allen Mouse ISHi
Max Expression energy 20.7
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 20.7
68844707 Antisense, RP_050222_02_C04, Mouse strain C57BL/6J (56 days, male) 21.7
71924087 Antisense, RP_051017_02_H10, Mouse strain C57BL/6J (56 days, male) 19.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.