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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:42.2 nTPM
HPA:42.2 nTPM
GTEx:44.2 nTPM
FANTOM5:35.9 Scaled Tags Per Million
Pig:13.9 nTPM
Mouse:29.0 nTPM
Allen mouse:1.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA024204
Glial cells Not detected
Neuronal cells High


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 42.2
Sample id Sample description nTPM
Hippocampus
nTPM: 40.6
2529 Female, age 94, left hemisphere 41.9
2621 Female, age 67, right hemisphere 41.2
1898 Male, age 80, left hemisphere 41.1
1855 Male, age 76, left hemisphere 40.6
1911 Female, age 85, right hemisphere 39.5
2148 Female, age 91, left hemisphere 39.3
Dentate gyrus
nTPM: 40.6
2530 Female, age 94, left hemisphere 52.2
2010 Male, age 76, both hemispheres 39.9
2531 Female, age 67, both hemispheres 39.9
1927 Female, age 91, both hemispheres 38.6
2246 Female, age 85, both hemispheres 37.3
2528 Male, age 74, both hemispheres 35.8
Entorhinal gyrus
nTPM: 42.2
2686 Male, age 75, right hemisphere 48.5
2117 Female, age 91, right hemisphere 42.4
2764 Male, age 80, right hemisphere 42.3
2613 Female, age 94, left hemisphere 40.5
1938 Female, age 85, left hemisphere 39.8
1787 Male, age 76, left hemisphere 39.7
Hippocampus, CA1
nTPM: 37.6
2749 Male, age 80, left hemisphere 40.2
1873 Female, age 85, both hemispheres 38.0
2082 Female, age 91, right hemisphere 37.7
2045 Male, age 76, both hemispheres 36.5
2527 Male, age 74, both hemispheres 35.5
Hippocampus, CA2
nTPM: 40.4
1963 Male, age 80, left hemisphere 45.7
2437 Female, age 94, left hemisphere 41.8
1892 Male, age 76, both hemispheres 41.3
1940 Female, age 85, left hemisphere 38.6
2113 Female, age 91, right hemisphere 38.2
2249 Male, age 74, both hemispheres 36.8
Hippocampus, CA3
nTPM: 37.0
2861 Female, age 67, both hemispheres 39.7
1891 Female, age 85, both hemispheres 39.5
1867 Male, age 76, both hemispheres 38.1
2620 Female, age 94, left hemisphere 36.5
2137 Male, age 80, left hemisphere 36.0
2436 Male, age 74, both hemispheres 32.2
Parahippocampal cortex
nTPM: 38.2
2532 Female, age 72, left hemisphere 40.8
2692 Male, age 74, both hemispheres 40.3
2622 Female, age 67, right hemisphere 39.9
1990 Female, age 91, right hemisphere 39.8
2245 Female, age 91, both hemispheres 38.5
1933 Female, age 85, both hemispheres 37.9
1850 Male, age 80, both hemispheres 37.8
2018 Male, age 76, both hemispheres 37.3
2693 Female, age 94, both hemispheres 34.8
2250 Female, age 67, right hemisphere 34.5
Perirhinal gyrus
nTPM: 36.5
1847 Female, age 91, left hemisphere 38.4
2848 Male, age 76, right hemisphere 37.2
1794 Male, age 80, right hemisphere 37.0
1841 Female, age 85, right hemisphere 36.0
2521 Female, age 94, right hemisphere 33.7
Subiculum
nTPM: 40.2
2438 Female, age 94, left hemisphere 43.0
1901 Male, age 80, both hemispheres 41.9
2042 Male, age 76, both hemispheres 41.1
1977 Female, age 85, both hemispheres 39.6
2729 Female, age 91, right hemisphere 39.5
2619 Male, age 74, both hemispheres 36.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 44.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 44.2
Samples: 197

Max nTPM: 140.4
Min nTPM: 13.1
Std nTPM: 21.3
Median nTPM: 39.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 140.4
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 134.7
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 109.7
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 108.4
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 100.3
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 99.9
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 97.7
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 95.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 92.6
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 87.0
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 86.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 35.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 35.9
FF:10153-102I9 76 years, female 42.5
FF:10169-103B7 60 years, female 29.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 13.9
Samples: 4

Max nTPM: 16.9
Min nTPM: 10.1
Sample A Female 16.9
Sample B Female 14.7
Sample C Male 13.8
Sample D Male 10.1
Entorhinal cortex
nTPM: 13.2
Samples: 4

Max nTPM: 14.1
Min nTPM: 12.1
Sample A Female 13.2
Sample B Female 14.1
Sample C Male 13.4
Sample D Male 12.1
Subiculum
nTPM: 13.0
Samples: 4

Max nTPM: 16.1
Min nTPM: 11.2
Sample A Female 16.1
Sample B Female 12.2
Sample C Male 12.5
Sample D Male 11.2
Ventral hippocampus
nTPM: 13.8
Samples: 4

Max nTPM: 16.9
Min nTPM: 10.8
Sample A Female 13.2
Sample B Female 10.8
Sample C Male 16.9
Sample D Male 14.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 29.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 29.0
Samples: 4

Max nTPM: 34.0
Min nTPM: 25.9
Sample A Male 28.6
Sample B Male 34.0
Sample C Female 25.9
Sample D Female 27.6
Hippocampal formation
nTPM: 27.4
Samples: 4

Max nTPM: 31.3
Min nTPM: 25.0
Sample A Male 26.9
Sample B Male 26.4
Sample C Female 31.3
Sample D Female 25.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.1
587432 Antisense, RP_040831_01_G06, Mouse strain C57BL/6J (56 days, male) 1.1

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