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DYNLT1
BASAL GANGLIA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:66.6 nTPM
HPA:66.6 nTPM
GTEx:49.9 nTPM
FANTOM5:23.3 Scaled Tags Per Million
Pig:27.7 nTPM
Mouse:28.4 nTPM
Allen mouse:1.8 Expression energy

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 66.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 63.7
1854 Male, age 80, left hemisphere 65.4
1857 Female, age 85, left hemisphere 64.8
2481 Female, age 94, left hemisphere 64.8
2289 Male, age 61, right hemisphere 64.3
2846 Female, age 79, unknown 63.4
1781 Male, age 74, unknown 62.5
2288 Male, age 75, left hemisphere 62.1
2290 Female, age 72, unknown 61.9
Claustrum
nTPM: 61.1
1956 Male, age 74, unknown 63.2
2392 Female, age 94, both hemispheres 62.4
2196 Female, age 79, unknown 61.5
2491 Male, age 75, both hemispheres 61.4
2292 Female, age 85, both hemispheres 61.2
2198 Male, age 80, both hemispheres 60.9
2645 Female, age 72, unknown 60.2
2284 Female, age 91, both hemispheres 59.6
2568 Male, age 61, both hemispheres 59.6
Globus pallidus, externus
nTPM: 66.2
1996 Male, age 80, right hemisphere 70.0
2772 Female, age 79, unknown 68.0
2395 Male, age 75, both hemispheres 66.4
2646 Male, age 61, right hemisphere 65.0
2567 Female, age 72, unknown 61.8
Globus pallidus, internus
nTPM: 66.6
2037 Male, age 80, right hemisphere 69.9
2778 Female, age 91, both hemispheres 67.5
1818 Male, age 74, unknown 66.9
2111 Female, age 85, right hemisphere 66.8
2483 Female, age 94, right hemisphere 65.8
2287 Male, age 75, right hemisphere 65.2
2566 Female, age 72, unknown 64.1
Nucleus accumbens
nTPM: 63.7
2732 Male, age 80, right hemisphere 68.4
2391 Female, age 94, left hemisphere 64.2
1806 Female, age 85, left hemisphere 64.1
2698 Female, age 72, unknown 63.8
2286 Male, age 75, left hemisphere 63.1
1856 Female, age 91, right hemisphere 62.6
2824 Male, age 61, right hemisphere 62.2
1783 Male, age 74, unknown 61.0
Nucleus basalis of Meynert
nTPM: 64.8
2569 Male, age 61, both hemispheres 66.4
2393 Male, age 80, right hemisphere 65.9
2821 Male, age 75, both hemispheres 63.6
2484 Female, age 94, left hemisphere 63.4
Nucleus of the diagonal band
nTPM: 62.5
1812 Female, age 91, both hemispheres 65.0
1979 Male, age 74, unknown 63.2
2775 Male, age 80, right hemisphere 61.8
2029 Male, age 61, right hemisphere 61.4
2195 Female, age 85, both hemispheres 61.0
Olfactory tubercle
nTPM: 62.0
1846 Male, age 80, right hemisphere 64.9
2856 Male, age 75, right hemisphere 62.1
2487 Female, age 94, left hemisphere 60.6
1998 Female, age 91, both hemispheres 60.5
Putamen
nTPM: 62.5
2482 Female, age 94, left hemisphere 64.9
1937 Female, age 91, right hemisphere 62.8
2489 Female, age 72, unknown 62.6
1838 Male, age 80, right hemisphere 62.3
2466 Female, age 79, unknown 62.1
1829 Male, age 74, unknown 61.8
2647 Male, age 75, left hemisphere 61.3
Septal nuclei
nTPM: 64.1
2199 Male, age 80, right hemisphere 67.0
2394 Male, age 61, left hemisphere 64.8
2009 Female, age 91, both hemispheres 64.2
2031 Female, age 72, unknown 64.1
2629 Female, age 94, right hemisphere 64.0
2059 Female, age 85, both hemispheres 63.3
1960 Male, age 74, unknown 61.4

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 49.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 48.7
Samples: 246

Max nTPM: 107.3
Min nTPM: 20.9
Std nTPM: 17.5
Median nTPM: 45.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 107.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 103.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 97.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 97.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 96.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 95.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 94.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 94.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 93.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 91.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 88.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 46.7
Samples: 246

Max nTPM: 134.4
Min nTPM: 18.5
Std nTPM: 19.8
Median nTPM: 41.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 134.4
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 127.2
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 125.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 114.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 100.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 99.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 97.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 90.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 90.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 89.4
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 87.9
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Brain - Putamen (basal ganglia)
Average nTPM: 49.9
Samples: 205

Max nTPM: 116.1
Min nTPM: 25.1
Std nTPM: 16.4
Median nTPM: 47.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 116.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 101.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 95.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 92.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 90.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 89.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 86.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 86.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 86.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 83.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 82.6
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 23.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 23.3
FF:10164-103B2 76 years, female 23.3
Globus pallidus
Scaled Tags Per Million: 22.5
FF:10175-103C4 60 years, female 24.4
FF:10161-103A8 76 years, female 20.5
Nucleus accumbens
Scaled Tags Per Million: 9.1
FF:10037-101F1 23-56 years, mixed 9.1
Putamen
Scaled Tags Per Million: 22.3
FF:10176-103C5 60 years, female 22.3

BASAL GANGLIA - Pig RNA-seqi
Average nTPM 27.7
Pig sample Sample description nTPM
Caudate
nTPM: 23.8
Samples: 4

Max nTPM: 25.8
Min nTPM: 20.1
Sample A Female 23.9
Sample B Female 25.3
Sample C Male 25.8
Sample D Male 20.1
Putamen
nTPM: 24.2
Samples: 4

Max nTPM: 30.0
Min nTPM: 15.6
Sample A Female 30.0
Sample B Female 15.6
Sample C Male 26.5
Sample D Male 24.5
Septum
nTPM: 27.7
Samples: 4

Max nTPM: 38.2
Min nTPM: 22.1
Sample A Female 23.7
Sample B Female 22.1
Sample C Male 26.6
Sample D Male 38.2
Ventral pallidum
nTPM: 24.2
Samples: 4

Max nTPM: 27.9
Min nTPM: 18.2
Sample A Female 18.2
Sample B Female 23.2
Sample C Male 27.9
Sample D Male 27.5

BASAL GANGLIA - Mouse RNA-seqi
Average nTPM 28.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 2.4
Samples: 4

Max nTPM: 2.8
Min nTPM: 1.9
Sample A Male 1.9
Sample B Male 2.3
Sample C Female 2.6
Sample D Female 2.8
Septum
nTPM: 2.7
Samples: 4

Max nTPM: 3.1
Min nTPM: 2.0
Sample A Male 3.1
Sample B Male 2.5
Sample C Female 2.0
Sample D Female 3.1
Ventral forebrain
nTPM: 2.3
Samples: 4

Max nTPM: 2.4
Min nTPM: 2.1
Sample A Male 2.4
Sample B Male 2.3
Sample C Female 2.3
Sample D Female 2.1

BASAL GANGLIA - Allen Mouse ISHi
Max Expression energy 1.8
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.5
71489780 Antisense, RP_050512_04_B06, Mouse strain C57BL/6J (56 days, male) 1.5
Striatum
Expression energy: 1.5
71489780 Antisense, RP_050512_04_B06, Mouse strain C57BL/6J (56 days, male) 1.5
Pallidum
Expression energy: 1.8
71489780 Antisense, RP_050512_04_B06, Mouse strain C57BL/6J (56 days, male) 1.8
Pallidum
Expression energy: 1.8
71489780 Antisense, RP_050512_04_B06, Mouse strain C57BL/6J (56 days, male) 1.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.