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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:18.0 nTPM
HPA:18.0 nTPM
GTEx:15.3 nTPM
FANTOM5:66.5 Scaled Tags Per Million
Pig:14.2 nTPM
Mouse:14.2 nTPM
Allen mouse:1.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044919
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 18.0
Sample id Sample description nTPM
Hippocampus
nTPM: 12.5
1911 Female, age 85, right hemisphere 19.7
2529 Female, age 94, left hemisphere 13.3
2621 Female, age 67, right hemisphere 11.7
2148 Female, age 91, left hemisphere 11.1
1898 Male, age 80, left hemisphere 9.6
1855 Male, age 76, left hemisphere 9.5
Dentate gyrus
nTPM: 15.2
2530 Female, age 94, left hemisphere 23.1
2010 Male, age 76, both hemispheres 16.0
2531 Female, age 67, both hemispheres 14.3
2246 Female, age 85, both hemispheres 14.1
2528 Male, age 74, both hemispheres 12.5
1927 Female, age 91, both hemispheres 11.1
Entorhinal gyrus
nTPM: 12.2
2117 Female, age 91, right hemisphere 18.9
2764 Male, age 80, right hemisphere 13.8
2686 Male, age 75, right hemisphere 11.5
1938 Female, age 85, left hemisphere 10.8
2613 Female, age 94, left hemisphere 10.6
1787 Male, age 76, left hemisphere 7.9
Hippocampus, CA1
nTPM: 11.2
1873 Female, age 85, both hemispheres 14.7
2045 Male, age 76, both hemispheres 12.8
2082 Female, age 91, right hemisphere 11.1
2527 Male, age 74, both hemispheres 11.1
2749 Male, age 80, left hemisphere 6.6
Hippocampus, CA2
nTPM: 12.6
1963 Male, age 80, left hemisphere 16.3
2437 Female, age 94, left hemisphere 13.4
2249 Male, age 74, both hemispheres 12.8
2113 Female, age 91, right hemisphere 12.5
1940 Female, age 85, left hemisphere 11.4
1892 Male, age 76, both hemispheres 9.0
Hippocampus, CA3
nTPM: 11.1
1891 Female, age 85, both hemispheres 23.9
1867 Male, age 76, both hemispheres 14.6
2620 Female, age 94, left hemisphere 8.8
2436 Male, age 74, both hemispheres 7.2
2137 Male, age 80, left hemisphere 6.5
2861 Female, age 67, both hemispheres 5.8
Parahippocampal cortex
nTPM: 10.2
2692 Male, age 74, both hemispheres 16.7
2532 Female, age 72, left hemisphere 15.9
1990 Female, age 91, right hemisphere 13.6
1933 Female, age 85, both hemispheres 11.0
2245 Female, age 91, both hemispheres 10.5
2018 Male, age 76, both hemispheres 9.9
1850 Male, age 80, both hemispheres 9.6
2693 Female, age 94, both hemispheres 7.0
2250 Female, age 67, right hemisphere 4.2
2622 Female, age 67, right hemisphere 4.0
Perirhinal gyrus
nTPM: 5.1
2848 Male, age 76, right hemisphere 5.8
2521 Female, age 94, right hemisphere 5.7
1794 Male, age 80, right hemisphere 5.2
1841 Female, age 85, right hemisphere 4.5
1847 Female, age 91, left hemisphere 4.5
Subiculum
nTPM: 18.0
2042 Male, age 76, both hemispheres 24.6
1901 Male, age 80, both hemispheres 23.7
2438 Female, age 94, left hemisphere 17.9
1977 Female, age 85, both hemispheres 17.3
2619 Male, age 74, both hemispheres 13.1
2729 Female, age 91, right hemisphere 11.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.3
Samples: 197

Max nTPM: 52.9
Min nTPM: 1.1
Std nTPM: 9.5
Median nTPM: 13.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 52.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 48.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 47.2
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 42.4
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 39.8
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 38.6
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 37.3
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 36.6
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 36.1
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 35.8
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 35.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 66.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 66.5
FF:10153-102I9 76 years, female 79.6
FF:10169-103B7 60 years, female 53.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 14.0
Samples: 4

Max nTPM: 18.6
Min nTPM: 9.0
Sample A Female 18.6
Sample B Female 11.6
Sample C Male 16.9
Sample D Male 9.0
Entorhinal cortex
nTPM: 4.3
Samples: 4

Max nTPM: 5.2
Min nTPM: 3.0
Sample A Female 3.8
Sample B Female 5.1
Sample C Male 3.0
Sample D Male 5.2
Subiculum
nTPM: 5.0
Samples: 4

Max nTPM: 6.3
Min nTPM: 3.7
Sample A Female 5.2
Sample B Female 6.3
Sample C Male 3.7
Sample D Male 4.9
Ventral hippocampus
nTPM: 14.2
Samples: 4

Max nTPM: 23.9
Min nTPM: 6.4
Sample A Female 23.9
Sample B Female 6.4
Sample C Male 13.8
Sample D Male 12.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 14.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 3.7
Samples: 4

Max nTPM: 5.7
Min nTPM: 1.3
Sample A Male 5.7
Sample B Male 2.2
Sample C Female 5.4
Sample D Female 1.3
Hippocampal formation
nTPM: 14.2
Samples: 4

Max nTPM: 16.4
Min nTPM: 11.1
Sample A Male 11.1
Sample B Male 14.4
Sample C Female 16.4
Sample D Female 14.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.1
69290531 Antisense, RP_050407_04_C01, Mouse strain C57BL/6J (56 days, male) 1.7
75038443 Antisense, RP_060412_04_A04, Mouse strain C57BL/6J (56 days, male) 0.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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