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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:27.0 nTPM
HPA:27.0 nTPM
GTEx:33.4 nTPM
FANTOM5:98.9 Scaled Tags Per Million
Pig:42.2 nTPM
Mouse:48.6 nTPM
Allen mouse:10.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA024702Antibody CAB017041
Glial cells Not detectedMedium
Neuronal cells Not detectedHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 27.0
Sample id Sample description nTPM
Hippocampus
nTPM: 20.4
1898 Male, age 80, left hemisphere 25.7
2621 Female, age 67, right hemisphere 22.5
2529 Female, age 94, left hemisphere 22.0
1855 Male, age 76, left hemisphere 20.0
1911 Female, age 85, right hemisphere 17.7
2148 Female, age 91, left hemisphere 14.2
Dentate gyrus
nTPM: 20.7
2531 Female, age 67, both hemispheres 26.1
2530 Female, age 94, left hemisphere 23.1
2010 Male, age 76, both hemispheres 22.5
1927 Female, age 91, both hemispheres 21.1
2246 Female, age 85, both hemispheres 18.0
2528 Male, age 74, both hemispheres 13.1
Entorhinal gyrus
nTPM: 24.7
2764 Male, age 80, right hemisphere 31.6
2613 Female, age 94, left hemisphere 26.3
1787 Male, age 76, left hemisphere 23.9
2686 Male, age 75, right hemisphere 23.9
2117 Female, age 91, right hemisphere 23.7
1938 Female, age 85, left hemisphere 18.8
Hippocampus, CA1
nTPM: 23.0
1873 Female, age 85, both hemispheres 31.6
2749 Male, age 80, left hemisphere 28.1
2045 Male, age 76, both hemispheres 26.4
2527 Male, age 74, both hemispheres 17.5
2082 Female, age 91, right hemisphere 11.2
Hippocampus, CA2
nTPM: 20.8
1963 Male, age 80, left hemisphere 36.0
1940 Female, age 85, left hemisphere 24.8
1892 Male, age 76, both hemispheres 19.7
2437 Female, age 94, left hemisphere 17.4
2113 Female, age 91, right hemisphere 14.6
2249 Male, age 74, both hemispheres 12.2
Hippocampus, CA3
nTPM: 24.1
2620 Female, age 94, left hemisphere 34.2
1891 Female, age 85, both hemispheres 25.0
2861 Female, age 67, both hemispheres 24.3
1867 Male, age 76, both hemispheres 23.4
2137 Male, age 80, left hemisphere 18.8
2436 Male, age 74, both hemispheres 18.6
Parahippocampal cortex
nTPM: 21.4
1850 Male, age 80, both hemispheres 28.9
1933 Female, age 85, both hemispheres 26.3
2532 Female, age 72, left hemisphere 21.6
2622 Female, age 67, right hemisphere 21.2
2693 Female, age 94, both hemispheres 21.2
2692 Male, age 74, both hemispheres 21.1
2018 Male, age 76, both hemispheres 20.8
1990 Female, age 91, right hemisphere 20.1
2245 Female, age 91, both hemispheres 17.7
2250 Female, age 67, right hemisphere 15.3
Perirhinal gyrus
nTPM: 27.0
1841 Female, age 85, right hemisphere 37.8
1794 Male, age 80, right hemisphere 31.1
2521 Female, age 94, right hemisphere 28.9
2848 Male, age 76, right hemisphere 20.7
1847 Female, age 91, left hemisphere 16.8
Subiculum
nTPM: 21.3
2042 Male, age 76, both hemispheres 25.1
1977 Female, age 85, both hemispheres 24.6
2619 Male, age 74, both hemispheres 24.6
1901 Male, age 80, both hemispheres 24.3
2438 Female, age 94, left hemisphere 16.6
2729 Female, age 91, right hemisphere 12.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.4
Samples: 197

Max nTPM: 89.6
Min nTPM: 8.0
Std nTPM: 11.7
Median nTPM: 32.5
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 89.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 70.1
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 64.6
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 63.4
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 60.0
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 59.7
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 57.6
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 56.4
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 52.6
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 52.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 52.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 98.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 98.9
FF:10153-102I9 76 years, female 107.9
FF:10169-103B7 60 years, female 89.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 42.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 39.1
Samples: 4

Max nTPM: 45.9
Min nTPM: 33.8
Sample A Female 37.7
Sample B Female 38.9
Sample C Male 45.9
Sample D Male 33.8
Entorhinal cortex
nTPM: 42.2
Samples: 4

Max nTPM: 50.2
Min nTPM: 38.7
Sample A Female 38.7
Sample B Female 38.9
Sample C Male 50.2
Sample D Male 40.9
Subiculum
nTPM: 40.1
Samples: 4

Max nTPM: 43.2
Min nTPM: 36.7
Sample A Female 43.2
Sample B Female 39.4
Sample C Male 41.2
Sample D Male 36.7
Ventral hippocampus
nTPM: 36.4
Samples: 4

Max nTPM: 46.8
Min nTPM: 32.6
Sample A Female 32.6
Sample B Female 32.7
Sample C Male 46.8
Sample D Male 33.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 48.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 48.6
Samples: 4

Max nTPM: 55.2
Min nTPM: 41.1
Sample A Male 49.5
Sample B Male 48.4
Sample C Female 41.1
Sample D Female 55.2
Hippocampal formation
nTPM: 30.4
Samples: 4

Max nTPM: 32.2
Min nTPM: 27.9
Sample A Male 32.2
Sample B Male 30.5
Sample C Female 30.9
Sample D Female 27.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.4
74579951 Antisense, RP_060215_01_E04, Mouse strain C57BL/6J (56 days, male) 10.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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