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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:66.0 nTPM
HPA:66.0 nTPM
GTEx:59.5 nTPM
FANTOM5:101.2 Scaled Tags Per Million
Pig:7.0 nTPM
Mouse:27.5 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA021023Antibody HPA022124
Glial cells LowMedium
Neuronal cells Not detectedMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 66.0
Sample id Sample description nTPM
Hippocampus
nTPM: 64.5
2529 Female, age 94, left hemisphere 68.8
1911 Female, age 85, right hemisphere 65.2
1898 Male, age 80, left hemisphere 65.0
1855 Male, age 76, left hemisphere 64.8
2148 Female, age 91, left hemisphere 64.0
2621 Female, age 67, right hemisphere 59.3
Dentate gyrus
nTPM: 63.0
2530 Female, age 94, left hemisphere 66.1
2528 Male, age 74, both hemispheres 65.4
2246 Female, age 85, both hemispheres 64.2
2010 Male, age 76, both hemispheres 63.3
2531 Female, age 67, both hemispheres 61.6
1927 Female, age 91, both hemispheres 57.2
Entorhinal gyrus
nTPM: 63.4
2117 Female, age 91, right hemisphere 74.3
2686 Male, age 75, right hemisphere 66.2
2764 Male, age 80, right hemisphere 62.4
1938 Female, age 85, left hemisphere 59.6
1787 Male, age 76, left hemisphere 59.3
2613 Female, age 94, left hemisphere 58.5
Hippocampus, CA1
nTPM: 62.9
2082 Female, age 91, right hemisphere 68.4
2527 Male, age 74, both hemispheres 65.4
1873 Female, age 85, both hemispheres 62.7
2045 Male, age 76, both hemispheres 59.6
2749 Male, age 80, left hemisphere 58.4
Hippocampus, CA2
nTPM: 62.4
2113 Female, age 91, right hemisphere 67.6
1963 Male, age 80, left hemisphere 65.0
2249 Male, age 74, both hemispheres 64.3
1940 Female, age 85, left hemisphere 61.4
2437 Female, age 94, left hemisphere 60.1
1892 Male, age 76, both hemispheres 56.3
Hippocampus, CA3
nTPM: 58.8
1891 Female, age 85, both hemispheres 66.9
2620 Female, age 94, left hemisphere 60.7
1867 Male, age 76, both hemispheres 57.4
2861 Female, age 67, both hemispheres 56.6
2137 Male, age 80, left hemisphere 56.2
2436 Male, age 74, both hemispheres 55.1
Parahippocampal cortex
nTPM: 60.1
2692 Male, age 74, both hemispheres 68.5
2018 Male, age 76, both hemispheres 63.7
2532 Female, age 72, left hemisphere 61.8
1990 Female, age 91, right hemisphere 61.3
2245 Female, age 91, both hemispheres 60.5
2622 Female, age 67, right hemisphere 58.5
1850 Male, age 80, both hemispheres 57.6
2693 Female, age 94, both hemispheres 57.5
1933 Female, age 85, both hemispheres 57.3
2250 Female, age 67, right hemisphere 54.3
Perirhinal gyrus
nTPM: 57.1
2848 Male, age 76, right hemisphere 58.9
1794 Male, age 80, right hemisphere 57.0
2521 Female, age 94, right hemisphere 57.0
1841 Female, age 85, right hemisphere 56.3
1847 Female, age 91, left hemisphere 56.2
Subiculum
nTPM: 66.0
2729 Female, age 91, right hemisphere 72.9
2619 Male, age 74, both hemispheres 66.1
2438 Female, age 94, left hemisphere 64.9
1901 Male, age 80, both hemispheres 64.7
2042 Male, age 76, both hemispheres 64.5
1977 Female, age 85, both hemispheres 62.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 59.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 59.5
Samples: 197

Max nTPM: 208.3
Min nTPM: 13.5
Std nTPM: 24.5
Median nTPM: 54.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 208.3
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 164.6
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 138.8
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 133.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 116.9
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 113.1
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 109.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 109.5
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 108.2
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 105.4
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 99.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 101.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 101.2
FF:10153-102I9 76 years, female 111.4
FF:10169-103B7 60 years, female 91.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 7.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 6.3
Samples: 4

Max nTPM: 7.2
Min nTPM: 5.2
Sample A Female 7.2
Sample B Female 6.6
Sample C Male 6.0
Sample D Male 5.2
Entorhinal cortex
nTPM: 6.0
Samples: 4

Max nTPM: 6.8
Min nTPM: 4.6
Sample A Female 6.3
Sample B Female 6.8
Sample C Male 6.4
Sample D Male 4.6
Subiculum
nTPM: 6.4
Samples: 4

Max nTPM: 7.8
Min nTPM: 4.4
Sample A Female 7.8
Sample B Female 6.4
Sample C Male 6.9
Sample D Male 4.4
Ventral hippocampus
nTPM: 7.0
Samples: 4

Max nTPM: 9.4
Min nTPM: 4.9
Sample A Female 7.5
Sample B Female 6.1
Sample C Male 9.4
Sample D Male 4.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 27.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 27.5
Samples: 4

Max nTPM: 28.2
Min nTPM: 26.5
Sample A Male 27.9
Sample B Male 27.2
Sample C Female 28.2
Sample D Female 26.5
Hippocampal formation
nTPM: 26.5
Samples: 4

Max nTPM: 27.3
Min nTPM: 25.9
Sample A Male 27.3
Sample B Male 25.9
Sample C Female 26.7
Sample D Female 26.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.