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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:16.9 nTPM
HPA:16.9 nTPM
GTEx:16.7 nTPM
FANTOM5:16.9 Scaled Tags Per Million
Pig:10.0 nTPM
Mouse:2.4 nTPM
Allen mouse:3.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA004341
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 16.9
Sample id Sample description nTPM
Hippocampus
nTPM: 15.6
1898 Male, age 80, left hemisphere 16.6
2148 Female, age 91, left hemisphere 16.1
2529 Female, age 94, left hemisphere 15.9
1855 Male, age 76, left hemisphere 15.2
1911 Female, age 85, right hemisphere 15.0
2621 Female, age 67, right hemisphere 15.0
Dentate gyrus
nTPM: 15.6
2528 Male, age 74, both hemispheres 16.1
1927 Female, age 91, both hemispheres 15.7
2010 Male, age 76, both hemispheres 15.6
2531 Female, age 67, both hemispheres 15.6
2246 Female, age 85, both hemispheres 15.3
2530 Female, age 94, left hemisphere 15.3
Entorhinal gyrus
nTPM: 16.5
2764 Male, age 80, right hemisphere 17.7
2613 Female, age 94, left hemisphere 16.9
2686 Male, age 75, right hemisphere 16.7
1938 Female, age 85, left hemisphere 16.4
1787 Male, age 76, left hemisphere 15.9
2117 Female, age 91, right hemisphere 15.1
Hippocampus, CA1
nTPM: 16.8
2749 Male, age 80, left hemisphere 20.0
2527 Male, age 74, both hemispheres 16.9
2082 Female, age 91, right hemisphere 16.4
1873 Female, age 85, both hemispheres 15.6
2045 Male, age 76, both hemispheres 15.3
Hippocampus, CA2
nTPM: 15.8
2113 Female, age 91, right hemisphere 16.8
1963 Male, age 80, left hemisphere 16.6
2437 Female, age 94, left hemisphere 16.2
1892 Male, age 76, both hemispheres 15.5
2249 Male, age 74, both hemispheres 15.5
1940 Female, age 85, left hemisphere 14.4
Hippocampus, CA3
nTPM: 16.9
2137 Male, age 80, left hemisphere 19.5
2620 Female, age 94, left hemisphere 18.4
2436 Male, age 74, both hemispheres 17.1
2861 Female, age 67, both hemispheres 16.8
1867 Male, age 76, both hemispheres 14.9
1891 Female, age 85, both hemispheres 14.8
Parahippocampal cortex
nTPM: 15.8
2622 Female, age 67, right hemisphere 17.3
1933 Female, age 85, both hemispheres 16.6
2532 Female, age 72, left hemisphere 16.4
2245 Female, age 91, both hemispheres 16.0
2692 Male, age 74, both hemispheres 15.9
2018 Male, age 76, both hemispheres 15.7
1990 Female, age 91, right hemisphere 15.2
2250 Female, age 67, right hemisphere 15.2
1850 Male, age 80, both hemispheres 15.0
2693 Female, age 94, both hemispheres 14.8
Perirhinal gyrus
nTPM: 15.8
1847 Female, age 91, left hemisphere 17.2
1794 Male, age 80, right hemisphere 17.1
1841 Female, age 85, right hemisphere 15.8
2521 Female, age 94, right hemisphere 14.5
2848 Male, age 76, right hemisphere 14.2
Subiculum
nTPM: 15.6
1977 Female, age 85, both hemispheres 16.5
1901 Male, age 80, both hemispheres 15.9
2619 Male, age 74, both hemispheres 15.8
2729 Female, age 91, right hemisphere 15.5
2042 Male, age 76, both hemispheres 15.0
2438 Female, age 94, left hemisphere 14.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.7
Samples: 197

Max nTPM: 33.7
Min nTPM: 8.3
Std nTPM: 4.4
Median nTPM: 16.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 33.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 30.3
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 28.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 28.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 27.4
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 27.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 25.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 25.4
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 25.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 25.0
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 24.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 16.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 16.9
FF:10169-103B7 60 years, female 20.9
FF:10153-102I9 76 years, female 12.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 10.0
Samples: 4

Max nTPM: 12.8
Min nTPM: 7.7
Sample A Female 12.8
Sample B Female 11.2
Sample C Male 8.3
Sample D Male 7.7
Entorhinal cortex
nTPM: 8.2
Samples: 4

Max nTPM: 8.8
Min nTPM: 7.5
Sample A Female 8.7
Sample B Female 7.5
Sample C Male 8.8
Sample D Male 7.9
Subiculum
nTPM: 9.0
Samples: 4

Max nTPM: 11.4
Min nTPM: 7.7
Sample A Female 11.4
Sample B Female 8.3
Sample C Male 8.7
Sample D Male 7.7
Ventral hippocampus
nTPM: 9.2
Samples: 4

Max nTPM: 11.6
Min nTPM: 6.2
Sample A Female 9.1
Sample B Female 6.2
Sample C Male 11.6
Sample D Male 10.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 2.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2.1
Samples: 4

Max nTPM: 2.6
Min nTPM: 1.4
Sample A Male 1.9
Sample B Male 2.5
Sample C Female 1.4
Sample D Female 2.6
Hippocampal formation
nTPM: 2.4
Samples: 4

Max nTPM: 2.9
Min nTPM: 1.6
Sample A Male 1.6
Sample B Male 2.4
Sample C Female 2.6
Sample D Female 2.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.1
1599 Antisense, RP_040507_02_F02, Mouse strain C57BL/6J (56 days, male) 3.1
1600 Antisense, RP_040507_02_F02, Mouse strain C57BL/6J (56 days, male) 2.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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