ABOUTMENU
HELP
NEWS
CACNA1B
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:3.5 nTPM
HPA:3.5 nTPM
GTEx:5.6 nTPM
FANTOM5:4.3 Scaled Tags Per Million
Pig:13.9 nTPM
Mouse:21.6 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044347
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 3.5
Sample id Sample description nTPM
Hippocampus
nTPM: 0.1
2148 Female, age 91, left hemisphere 0.7
1855 Male, age 76, left hemisphere 0.0
1898 Male, age 80, left hemisphere 0.0
1911 Female, age 85, right hemisphere 0.0
2529 Female, age 94, left hemisphere 0.0
2621 Female, age 67, right hemisphere 0.0
Dentate gyrus
nTPM: 1.4
2531 Female, age 67, both hemispheres 8.2
2246 Female, age 85, both hemispheres 0.2
1927 Female, age 91, both hemispheres 0.0
2010 Male, age 76, both hemispheres 0.0
2528 Male, age 74, both hemispheres 0.0
2530 Female, age 94, left hemisphere 0.0
Entorhinal gyrus
nTPM: 3.3
2613 Female, age 94, left hemisphere 14.9
2686 Male, age 75, right hemisphere 4.8
1787 Male, age 76, left hemisphere 0.0
1938 Female, age 85, left hemisphere 0.0
2117 Female, age 91, right hemisphere 0.0
2764 Male, age 80, right hemisphere 0.0
Hippocampus, CA1
nTPM: 0.0
1873 Female, age 85, both hemispheres 0.0
2045 Male, age 76, both hemispheres 0.0
2082 Female, age 91, right hemisphere 0.0
2527 Male, age 74, both hemispheres 0.0
2749 Male, age 80, left hemisphere 0.0
Hippocampus, CA2
nTPM: 0.0
1892 Male, age 76, both hemispheres 0.0
1940 Female, age 85, left hemisphere 0.0
1963 Male, age 80, left hemisphere 0.0
2113 Female, age 91, right hemisphere 0.0
2249 Male, age 74, both hemispheres 0.0
2437 Female, age 94, left hemisphere 0.0
Hippocampus, CA3
nTPM: 2.5
2620 Female, age 94, left hemisphere 11.2
2861 Female, age 67, both hemispheres 3.7
2137 Male, age 80, left hemisphere 0.1
1867 Male, age 76, both hemispheres 0.0
1891 Female, age 85, both hemispheres 0.0
2436 Male, age 74, both hemispheres 0.0
Parahippocampal cortex
nTPM: 3.5
2622 Female, age 67, right hemisphere 21.4
2693 Female, age 94, both hemispheres 14.4
1850 Male, age 80, both hemispheres 0.0
1933 Female, age 85, both hemispheres 0.0
1990 Female, age 91, right hemisphere 0.0
2018 Male, age 76, both hemispheres 0.0
2245 Female, age 91, both hemispheres 0.0
2250 Female, age 67, right hemisphere 0.0
2532 Female, age 72, left hemisphere 0.0
2692 Male, age 74, both hemispheres 0.0
Perirhinal gyrus
nTPM: 2.7
2521 Female, age 94, right hemisphere 5.9
2848 Male, age 76, right hemisphere 3.2
1794 Male, age 80, right hemisphere 2.0
1847 Female, age 91, left hemisphere 1.6
1841 Female, age 85, right hemisphere 0.6
Subiculum
nTPM: 0.0
1901 Male, age 80, both hemispheres 0.0
1977 Female, age 85, both hemispheres 0.0
2042 Male, age 76, both hemispheres 0.0
2438 Female, age 94, left hemisphere 0.0
2619 Male, age 74, both hemispheres 0.0
2729 Female, age 91, right hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 5.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 5.6
Samples: 197

Max nTPM: 15.6
Min nTPM: 0.2
Std nTPM: 3.6
Median nTPM: 4.9
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 15.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 15.2
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 14.8
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 14.2
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 13.6
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 13.5
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 13.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 13.2
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 12.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 12.8
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 12.8
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 4.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 4.3
FF:10153-102I9 76 years, female 4.4
FF:10169-103B7 60 years, female 4.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 12.4
Samples: 4

Max nTPM: 15.9
Min nTPM: 6.3
Sample A Female 13.8
Sample B Female 15.9
Sample C Male 6.3
Sample D Male 13.5
Entorhinal cortex
nTPM: 13.9
Samples: 4

Max nTPM: 15.3
Min nTPM: 11.7
Sample A Female 14.5
Sample B Female 11.7
Sample C Male 15.3
Sample D Male 14.2
Subiculum
nTPM: 12.2
Samples: 4

Max nTPM: 14.9
Min nTPM: 10.6
Sample A Female 14.9
Sample B Female 11.3
Sample C Male 11.8
Sample D Male 10.6
Ventral hippocampus
nTPM: 12.1
Samples: 4

Max nTPM: 13.4
Min nTPM: 11.4
Sample A Female 11.7
Sample B Female 11.4
Sample C Male 13.4
Sample D Male 12.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 21.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.6
Samples: 4

Max nTPM: 26.5
Min nTPM: 19.2
Sample A Male 19.2
Sample B Male 20.4
Sample C Female 20.4
Sample D Female 26.5
Hippocampal formation
nTPM: 20.9
Samples: 4

Max nTPM: 25.5
Min nTPM: 15.5
Sample A Male 15.5
Sample B Male 24.8
Sample C Female 25.5
Sample D Female 17.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
81600564 Antisense, RP_080625_04_E08, Mouse strain C57BL/6J (56 days, male) 1.9
71307202 Antisense, RP_050825_01_D10, Mouse strain C57BL/6J (56 days, male) 0.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.