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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:34.7 nTPM
HPA:34.7 nTPM
GTEx:28.1 nTPM
FANTOM5:71.9 Scaled Tags Per Million
Pig:47.1 nTPM
Mouse:106.2 nTPM
Allen mouse:14.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036584
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 34.7
Sample id Sample description nTPM
Hippocampus
nTPM: 33.5
1898 Male, age 80, left hemisphere 35.5
1911 Female, age 85, right hemisphere 34.2
1855 Male, age 76, left hemisphere 34.1
2529 Female, age 94, left hemisphere 32.7
2621 Female, age 67, right hemisphere 32.6
2148 Female, age 91, left hemisphere 31.8
Dentate gyrus
nTPM: 33.0
1927 Female, age 91, both hemispheres 34.5
2010 Male, age 76, both hemispheres 34.5
2528 Male, age 74, both hemispheres 33.0
2246 Female, age 85, both hemispheres 32.4
2530 Female, age 94, left hemisphere 32.2
2531 Female, age 67, both hemispheres 31.4
Entorhinal gyrus
nTPM: 32.4
1938 Female, age 85, left hemisphere 33.9
2117 Female, age 91, right hemisphere 33.0
1787 Male, age 76, left hemisphere 32.7
2764 Male, age 80, right hemisphere 32.5
2613 Female, age 94, left hemisphere 31.6
2686 Male, age 75, right hemisphere 30.9
Hippocampus, CA1
nTPM: 34.7
2749 Male, age 80, left hemisphere 37.7
1873 Female, age 85, both hemispheres 35.1
2045 Male, age 76, both hemispheres 34.3
2527 Male, age 74, both hemispheres 33.4
2082 Female, age 91, right hemisphere 33.3
Hippocampus, CA2
nTPM: 33.5
1892 Male, age 76, both hemispheres 35.8
2249 Male, age 74, both hemispheres 35.2
1963 Male, age 80, left hemisphere 34.9
2113 Female, age 91, right hemisphere 32.0
1940 Female, age 85, left hemisphere 31.7
2437 Female, age 94, left hemisphere 31.6
Hippocampus, CA3
nTPM: 33.2
1867 Male, age 76, both hemispheres 34.9
1891 Female, age 85, both hemispheres 34.6
2137 Male, age 80, left hemisphere 34.4
2436 Male, age 74, both hemispheres 33.8
2620 Female, age 94, left hemisphere 31.3
2861 Female, age 67, both hemispheres 30.3
Parahippocampal cortex
nTPM: 32.1
2018 Male, age 76, both hemispheres 33.4
1850 Male, age 80, both hemispheres 33.0
1990 Female, age 91, right hemisphere 32.8
2693 Female, age 94, both hemispheres 32.7
2250 Female, age 67, right hemisphere 32.4
2532 Female, age 72, left hemisphere 32.4
1933 Female, age 85, both hemispheres 32.3
2692 Male, age 74, both hemispheres 31.9
2245 Female, age 91, both hemispheres 31.0
2622 Female, age 67, right hemisphere 29.7
Perirhinal gyrus
nTPM: 33.3
1847 Female, age 91, left hemisphere 34.7
1794 Male, age 80, right hemisphere 33.8
1841 Female, age 85, right hemisphere 33.3
2521 Female, age 94, right hemisphere 33.2
2848 Male, age 76, right hemisphere 31.7
Subiculum
nTPM: 33.4
2438 Female, age 94, left hemisphere 35.1
1977 Female, age 85, both hemispheres 34.1
1901 Male, age 80, both hemispheres 33.8
2042 Male, age 76, both hemispheres 33.2
2619 Male, age 74, both hemispheres 32.6
2729 Female, age 91, right hemisphere 31.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.1
Samples: 197

Max nTPM: 54.0
Min nTPM: 12.0
Std nTPM: 6.6
Median nTPM: 27.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 54.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 52.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 46.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 44.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 44.1
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 41.8
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 41.5
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 40.6
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 40.4
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 38.9
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 38.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 71.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 71.9
FF:10169-103B7 60 years, female 87.8
FF:10153-102I9 76 years, female 56.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 47.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 47.2
Samples: 4

Max nTPM: 55.3
Min nTPM: 42.5
Sample A Female 55.3
Sample B Female 42.5
Sample C Male 46.5
Sample D Male 44.4
Entorhinal cortex
nTPM: 35.3
Samples: 4

Max nTPM: 37.9
Min nTPM: 32.0
Sample A Female 37.9
Sample B Female 37.5
Sample C Male 33.9
Sample D Male 32.0
Subiculum
nTPM: 37.5
Samples: 4

Max nTPM: 46.0
Min nTPM: 31.8
Sample A Female 46.0
Sample B Female 37.5
Sample C Male 31.8
Sample D Male 34.7
Ventral hippocampus
nTPM: 39.2
Samples: 4

Max nTPM: 44.2
Min nTPM: 35.3
Sample A Female 40.0
Sample B Female 37.1
Sample C Male 35.3
Sample D Male 44.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 106.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 95.2
Samples: 4

Max nTPM: 102.8
Min nTPM: 88.7
Sample A Male 88.7
Sample B Male 100.3
Sample C Female 102.8
Sample D Female 88.9
Hippocampal formation
nTPM: 106.2
Samples: 4

Max nTPM: 114.9
Min nTPM: 98.1
Sample A Male 114.9
Sample B Male 98.1
Sample C Female 105.0
Sample D Female 106.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.1
69262340 Antisense, RP_050303_02_B10, Mouse strain C57BL/6J (56 days, male) 14.1

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