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MSRB2
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:29.5 nTPM
HPA:29.5 nTPM
GTEx:23.0 nTPM
FANTOM5:25.0 Scaled Tags Per Million
Pig:18.1 nTPM
Mouse:41.5 nTPM
Allen mouse:2.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027933
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 29.5
Sample id Sample description nTPM
Hippocampus
nTPM: 28.6
2148 Female, age 91, left hemisphere 30.0
2621 Female, age 67, right hemisphere 28.9
1911 Female, age 85, right hemisphere 28.8
2529 Female, age 94, left hemisphere 28.7
1855 Male, age 76, left hemisphere 27.9
1898 Male, age 80, left hemisphere 27.2
Dentate gyrus
nTPM: 28.6
1927 Female, age 91, both hemispheres 29.7
2246 Female, age 85, both hemispheres 29.0
2528 Male, age 74, both hemispheres 28.7
2530 Female, age 94, left hemisphere 28.7
2531 Female, age 67, both hemispheres 28.6
2010 Male, age 76, both hemispheres 27.0
Entorhinal gyrus
nTPM: 28.8
1938 Female, age 85, left hemisphere 29.6
2686 Male, age 75, right hemisphere 29.1
2117 Female, age 91, right hemisphere 28.9
1787 Male, age 76, left hemisphere 28.7
2613 Female, age 94, left hemisphere 28.4
2764 Male, age 80, right hemisphere 28.2
Hippocampus, CA1
nTPM: 29.0
2527 Male, age 74, both hemispheres 30.7
2749 Male, age 80, left hemisphere 30.2
2045 Male, age 76, both hemispheres 28.5
1873 Female, age 85, both hemispheres 28.1
2082 Female, age 91, right hemisphere 27.6
Hippocampus, CA2
nTPM: 28.5
1892 Male, age 76, both hemispheres 29.2
2249 Male, age 74, both hemispheres 29.2
1963 Male, age 80, left hemisphere 29.1
2437 Female, age 94, left hemisphere 29.1
2113 Female, age 91, right hemisphere 28.7
1940 Female, age 85, left hemisphere 25.5
Hippocampus, CA3
nTPM: 29.5
2137 Male, age 80, left hemisphere 31.1
2620 Female, age 94, left hemisphere 29.7
2861 Female, age 67, both hemispheres 29.7
1867 Male, age 76, both hemispheres 29.3
1891 Female, age 85, both hemispheres 28.7
2436 Male, age 74, both hemispheres 28.3
Parahippocampal cortex
nTPM: 29.0
2692 Male, age 74, both hemispheres 31.4
2250 Female, age 67, right hemisphere 29.9
2245 Female, age 91, both hemispheres 29.6
2622 Female, age 67, right hemisphere 29.5
1990 Female, age 91, right hemisphere 29.2
1933 Female, age 85, both hemispheres 28.5
2693 Female, age 94, both hemispheres 28.3
2018 Male, age 76, both hemispheres 27.9
2532 Female, age 72, left hemisphere 27.9
1850 Male, age 80, both hemispheres 27.7
Perirhinal gyrus
nTPM: 28.3
1847 Female, age 91, left hemisphere 29.4
2521 Female, age 94, right hemisphere 28.6
1841 Female, age 85, right hemisphere 28.3
1794 Male, age 80, right hemisphere 27.7
2848 Male, age 76, right hemisphere 27.6
Subiculum
nTPM: 28.8
2438 Female, age 94, left hemisphere 29.8
2619 Male, age 74, both hemispheres 29.6
2729 Female, age 91, right hemisphere 29.3
1977 Female, age 85, both hemispheres 28.8
1901 Male, age 80, both hemispheres 28.0
2042 Male, age 76, both hemispheres 27.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.0
Samples: 197

Max nTPM: 43.5
Min nTPM: 10.9
Std nTPM: 7.0
Median nTPM: 21.6
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 43.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 42.6
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 41.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 41.1
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 40.8
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 40.1
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 39.2
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 38.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 38.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 37.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 37.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 25.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 25.0
FF:10169-103B7 60 years, female 26.1
FF:10153-102I9 76 years, female 23.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.1
Samples: 4

Max nTPM: 23.4
Min nTPM: 13.2
Sample A Female 23.4
Sample B Female 14.6
Sample C Male 13.2
Sample D Male 21.3
Entorhinal cortex
nTPM: 15.4
Samples: 4

Max nTPM: 19.4
Min nTPM: 13.1
Sample A Female 19.4
Sample B Female 13.6
Sample C Male 13.1
Sample D Male 15.6
Subiculum
nTPM: 15.7
Samples: 4

Max nTPM: 22.1
Min nTPM: 10.7
Sample A Female 22.1
Sample B Female 12.2
Sample C Male 10.7
Sample D Male 17.8
Ventral hippocampus
nTPM: 16.3
Samples: 4

Max nTPM: 21.1
Min nTPM: 10.4
Sample A Female 21.1
Sample B Female 10.4
Sample C Male 13.0
Sample D Male 20.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 41.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 29.7
Samples: 4

Max nTPM: 32.1
Min nTPM: 26.6
Sample A Male 31.6
Sample B Male 28.6
Sample C Female 32.1
Sample D Female 26.6
Hippocampal formation
nTPM: 41.5
Samples: 4

Max nTPM: 45.3
Min nTPM: 37.1
Sample A Male 45.3
Sample B Male 37.1
Sample C Female 42.0
Sample D Female 41.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.4
76135795 Antisense, RP_060530_02_G08, Mouse strain C57BL/6J (56 days, male) 3.6
79360298 Antisense, RP_071018_01_H04, Mouse strain C57BL/6J (56 days, male) 1.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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