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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:13.9 nTPM
HPA:13.9 nTPM
GTEx:12.8 nTPM
FANTOM5:45.1 Scaled Tags Per Million
Pig:11.4 nTPM
Mouse:16.9 nTPM
Allen mouse:1.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA021188Antibody HPA024131
Glial cells Not detectedLow
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.9
Sample id Sample description nTPM
Hippocampus
nTPM: 13.6
1898 Male, age 80, left hemisphere 14.2
1855 Male, age 76, left hemisphere 13.8
2621 Female, age 67, right hemisphere 13.7
2529 Female, age 94, left hemisphere 13.5
1911 Female, age 85, right hemisphere 13.4
2148 Female, age 91, left hemisphere 12.9
Dentate gyrus
nTPM: 13.5
2530 Female, age 94, left hemisphere 14.3
2010 Male, age 76, both hemispheres 14.2
2528 Male, age 74, both hemispheres 13.7
1927 Female, age 91, both hemispheres 13.5
2246 Female, age 85, both hemispheres 13.2
2531 Female, age 67, both hemispheres 12.3
Entorhinal gyrus
nTPM: 12.8
2117 Female, age 91, right hemisphere 14.1
1938 Female, age 85, left hemisphere 13.4
1787 Male, age 76, left hemisphere 12.6
2764 Male, age 80, right hemisphere 12.5
2686 Male, age 75, right hemisphere 12.4
2613 Female, age 94, left hemisphere 12.2
Hippocampus, CA1
nTPM: 13.4
1873 Female, age 85, both hemispheres 13.8
2527 Male, age 74, both hemispheres 13.5
2082 Female, age 91, right hemisphere 13.3
2749 Male, age 80, left hemisphere 13.3
2045 Male, age 76, both hemispheres 13.2
Hippocampus, CA2
nTPM: 13.8
2249 Male, age 74, both hemispheres 15.7
1963 Male, age 80, left hemisphere 14.5
1892 Male, age 76, both hemispheres 13.8
1940 Female, age 85, left hemisphere 13.2
2113 Female, age 91, right hemisphere 12.7
2437 Female, age 94, left hemisphere 12.7
Hippocampus, CA3
nTPM: 13.2
2436 Male, age 74, both hemispheres 14.6
1867 Male, age 76, both hemispheres 14.1
1891 Female, age 85, both hemispheres 14.1
2137 Male, age 80, left hemisphere 13.3
2620 Female, age 94, left hemisphere 12.1
2861 Female, age 67, both hemispheres 11.2
Parahippocampal cortex
nTPM: 12.8
2692 Male, age 74, both hemispheres 13.6
2693 Female, age 94, both hemispheres 13.5
1850 Male, age 80, both hemispheres 13.4
1990 Female, age 91, right hemisphere 13.2
1933 Female, age 85, both hemispheres 13.1
2018 Male, age 76, both hemispheres 12.9
2532 Female, age 72, left hemisphere 12.9
2250 Female, age 67, right hemisphere 12.8
2245 Female, age 91, both hemispheres 12.1
2622 Female, age 67, right hemisphere 11.2
Perirhinal gyrus
nTPM: 12.9
1841 Female, age 85, right hemisphere 13.4
2521 Female, age 94, right hemisphere 13.3
1794 Male, age 80, right hemisphere 12.9
2848 Male, age 76, right hemisphere 12.6
1847 Female, age 91, left hemisphere 12.4
Subiculum
nTPM: 13.9
2438 Female, age 94, left hemisphere 14.5
1901 Male, age 80, both hemispheres 14.4
1977 Female, age 85, both hemispheres 14.3
2042 Male, age 76, both hemispheres 14.1
2619 Male, age 74, both hemispheres 13.4
2729 Female, age 91, right hemisphere 13.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.8
Samples: 197

Max nTPM: 28.8
Min nTPM: 4.2
Std nTPM: 4.8
Median nTPM: 12.0
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 28.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 27.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 25.5
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 24.4
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 24.3
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 23.2
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 23.1
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 22.8
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 22.8
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 22.3
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 22.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 45.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 45.1
FF:10169-103B7 60 years, female 57.5
FF:10153-102I9 76 years, female 32.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 11.4
Samples: 4

Max nTPM: 13.2
Min nTPM: 10.2
Sample A Female 13.2
Sample B Female 10.6
Sample C Male 11.4
Sample D Male 10.2
Entorhinal cortex
nTPM: 9.6
Samples: 4

Max nTPM: 12.7
Min nTPM: 7.5
Sample A Female 8.8
Sample B Female 12.7
Sample C Male 9.5
Sample D Male 7.5
Subiculum
nTPM: 9.7
Samples: 4

Max nTPM: 10.0
Min nTPM: 8.8
Sample A Female 10.0
Sample B Female 10.0
Sample C Male 8.8
Sample D Male 10.0
Ventral hippocampus
nTPM: 9.8
Samples: 4

Max nTPM: 10.3
Min nTPM: 9.6
Sample A Female 9.7
Sample B Female 9.6
Sample C Male 9.6
Sample D Male 10.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 16.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.2
Samples: 4

Max nTPM: 20.7
Min nTPM: 14.0
Sample A Male 14.0
Sample B Male 14.2
Sample C Female 20.7
Sample D Female 15.7
Hippocampal formation
nTPM: 16.9
Samples: 4

Max nTPM: 19.4
Min nTPM: 13.4
Sample A Male 19.1
Sample B Male 15.6
Sample C Female 13.4
Sample D Female 19.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.8
68522510 Antisense, RP_050118_02_B10, Mouse strain C57BL/6J (56 days, male) 1.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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